Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 132 4e-26 seq9 123 2e-23 seq7 82.4 6e-11 >seq3 Length=3706406 Score = 132 bits (146), Expect = 4e-26 Identities = 150/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || || ||| |||| ||||| ||||| | Sbjct 1555019 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1555078 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || ||||||||||| || || ||||| Sbjct 1555079 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 1555138 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || || || || || |||||||| ||| | |||||| ||||||| ||||||| ||| Sbjct 1555139 CAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTAC 1555198 Query 22396 AACATTCAAAAAGAATCCACC 22416 ||||| || || || |||||| Sbjct 1555199 AACATCCAGAAGGAGTCCACC 1555219 >seq9 Length=1038790 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 22231 GTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGAC 22290 || || ||| | || |||||||| |||| || || || || || |||| ||| | ||| Sbjct 526935 GTCAAGACTCTCACGGGTAAAACAATCACCCTCGAGGTCGAGTCCTCCGACACCATCGAC 526994 Query 22291 GATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATA 22350 || |||| || || |||||||||||||| || || ||||| || || ||||| || Sbjct 526995 AATGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATC 527054 Query 22351 TTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAA 22410 || ||||| || ||| | ||||| ||| ||| ||||||| |||||||| || || || Sbjct 527055 TTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAG 527114 Query 22411 TCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| | ||| | || | || |||| || ||| Sbjct 527115 TCCACCCTCCATCTCGTCCTCCGTCTGCGTGGTGGT 527150 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || |||| || || ||||| | || Sbjct 526592 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCGTCC 526651 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || || ||||||||||| || || || || || Sbjct 526652 GACACCATTGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 526711 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || ||||| ||||| || | |||||| |||||| | || ||||||||| Sbjct 526712 CAACGCCTCATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACTTTGTCGGATTACAAC 526771 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || || |||||| Sbjct 526772 ATCCAGAAGGAGTCCACC 526789 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || || || || || |||| || || || || | | Sbjct 527151 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACGCTCGAGGTTGAGTCATCG 527210 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | |||| || ||||||||||||||||||||||| || ||||| Sbjct 527211 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCTGATCAG 527270 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || || ||||| ||||| || || || ||| ||||||| |||||| Sbjct 527271 CAGCGATTGATTTTCGCGGGCAAGCAGTTGGAAGACGGTCGGACCCTCTCCGACTACAAC 527330 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || ||||| || | || | || |||| |||| || ||| Sbjct 527331 ATTCAGAAGGAATCGACATTGCACCTGGTCCTGCGTCTGCGTGGTGGT 527378 >seq7 Length=1181343 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || || | || || | Sbjct 1039664 TTTCGTGAAGACCCTCACGGGTAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACGAT 1039605 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || ||||||||||| || || ||||| || || || | Sbjct 1039604 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGATT 1039545 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | || ||| ||| ||| ||||||| |||||||| || || Sbjct 1039544 GATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGGACCCTCTCCGACTACAACATCCAGAA 1039485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727851652385