Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq8 545 4e-150 seq1 417 2e-111 >seq8 Length=1130364 Score = 545 bits (604), Expect = 4e-150 Identities = 1260/1884 (67%), Gaps = 61/1884 (3%) Strand=Plus/Minus Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800 ||||||||| ||| || | || |||| || | |||||||||||||| |||||||| | Sbjct 758904 TGAACTGGATGGGGGCCGCAGCAGCCTGCGTGCGTAGGTAGTACATGCCCGTCTTGAGGC 758845 Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG- 243859 | |||| || || ||||||| ||| | ||| ||| ||||| Sbjct 758844 CGAGCTTCCAGCCGGTGAAGTGCATGCTCGTGATCTTGCCCAT-----------GGTCGG 758796 Query 243860 -TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTG 243917 |||| || || |||||||||||| |||||||| ||||| |||| || || | Sbjct 758795 GTCCTT---CATGTGGATGTTGAGGGACTGAGACTGGTCGATGAAGG-CGCCGCGGTCCG 758740 Query 243918 CGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977 ||||||| || || | ||| || ||||| || |||||||||| | | ||||| Sbjct 758739 CGGCCATCTGGACGATCTGGCGCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGA 758680 Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037 || | | || |||||| || | ||||| || | |||||| || | Sbjct 758679 TCTGGGCCGAGATGTTGGGGATGTTTTGGATGGAGCCATTCTCAGCGATGATGCGGTTCT 758620 Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCA 244097 |||| ||| |||||| ||| |||| ||| || ||| ||| || | Sbjct 758619 TCATGGCGTCGGACCACAGACCCGCATCAACCAGGTCCTTGAGCAGCCAGGGGTTGACGA 758560 Query 244098 CCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGC 244157 |||| || || || | ||| || || |||||||||| |||| || ||||||| || Sbjct 758559 CCTGGAATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGC 758500 Query 244158 TCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGAC 244217 || ||||||| || ||||||| ||||| || ||||||||||||| ||||||| | Sbjct 758499 ATTCGTTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACCAGCAAGC 758440 Query 244218 TGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAG---TCCCACATGC 244274 |||| | | ||||||| || ||| ||| ||| ||| || |||||| Sbjct 758439 TGTTGCGGAGGCCGTGCTCCTTGAT-------CTG--CTCCTTCAAGGAGTCCCACT--- 758392 Query 244275 CCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGG 244334 || | ||||| | |||| | |||||||||| |||| || | |||| | | | Sbjct 758391 CCCACAGGTCGGACGGCTTGACGTCCCACATGTCGTACTGAAGAATGCCCTCCGAGGCAG 758332 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGA 244394 | |||| | | | | ||||| || ||| || ||| | || | | |||| Sbjct 758331 GAGATCCCTTGAACGATGAATAGGGGCCTTCGACCTTGGCGATCTCCATGGAGGCCTCGA 758272 Query 244395 GGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGG 244454 | | |||| ||||||||||||||||||| ||||||||| ||||| |||| | | | Sbjct 758271 GAGATGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAGCTCGCGAGCCTCGGGGGACT 758212 Query 244455 TGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGG 244514 ||| || || | || | |||| ||||||| || |||||||| |||| |||||||| Sbjct 758211 CGAAAGGCATTCGCAGGGCAAGGAAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGG 758152 Query 244515 GTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCA 244574 | | ||| ||| ||||| | | ||| || | || ||||| ||| ||||||| | Sbjct 758151 GGCGGTGGCGCATGTTGCTGTTCCAGGCCTCCTGGACCGGGTAGTGGTTCACGTCGATGA 758092 Query 244575 CCTTGTTGAGGTTGCG---GGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631 ||||||||||||| | || | || ||| ||| | ||| ||| ||||| | Sbjct 758091 TTCTGTTGAGGTTGCGAACGACGACCTTGGTGACCTCGTGG---AGCTTCTGGAAGTCAT 758035 Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691 | | || |||| || || || || || | ||||| | | |||| Sbjct 758034 A---GCAGC---CCTC----ATTGTAGTCG--ACGAATGCCGGCAGGGCCAGGGACGCCA 757987 Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751 ||||||||||||||||||| || | | || ||||| || ||||||||||||||||| Sbjct 757986 GGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTACTCGATGATCTCGGTGCAGAGGTTGG 757927 Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811 || ||| || || |||| || || ||| ||| |||||||||||||||||| | Sbjct 757926 AGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTACA 757867 Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871 |||||||||| |||||||| |||||| |||||| | || ||| || | | | Sbjct 757866 GCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGATGGAGTACCACAGCTTCTGCG 757807 Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 | | ||| |||| | |||||| ||||| ||||||||||||||||| Sbjct 757806 CACGAATGGTCTTGCGGCCACGGCCCTCCTTTTCGTACTTTTCGTACAGGGCCTCGAACT 757747 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCCACTC 244989 | |||| || ||| | ||||||||||| || | ||||||||||| |||| || Sbjct 757746 CTTGGCCGTAGCAGTCGGCGAGGCCGGGGCATTCGTTG--GGGCACATGAGCGTCCAGTC 757689 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 | | | || ||| | || ||||||||| |||||||||||||||||| |||| ||||| Sbjct 757688 GAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTC 757629 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 || || | ||| ||| |||| |||||| | || || | || || |||||||| Sbjct 757628 CCGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGCAAGTCGAGGAACTCGAAGACGTC 757569 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 | ||||||||||||| | ||||| |||| ||||||||| ||||||||||| |||||||| Sbjct 757568 GGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTC 757509 Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || || || |||| ||| ||| || | || | |||||||| ||| || Sbjct 757508 GACGTATCTGGCGGTGTTGTTGTAGACGCGGAGCATGGGAATAATGCCGTTGGAGGTTCC 757449 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289 ||||| || ||| |||| ||| || | | || | | || | || || | || Sbjct 757448 ATTGGTTCCGGCGATATAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACCGATGCC 757389 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 || || ||||||||| | |||||| |||||| |||||| |||||||| ||||| Sbjct 757388 ACCAGCCATCTTGGAGATCATGGCGCACGTCTTGAGGGTGTCGTAGATGCCCTCGATGCT 757329 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| |||||||| || || ||||| ||||||||||||| || |||| | | | ||| Sbjct 757328 GTCGTCCTTCATGTCGACCAAGAAGCACGAGGACAGCTGGGCCTGGGGGGTTCCGGCGTT 757269 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGAG 245469 ||| || ||||| ||||| || ||| | ||| || | || ||| |||| ||| Sbjct 757268 GAAGAGGGTGGGAGACGCGTGCGTGAAGAACTTGCTGGACATGAGATTGTATGTCTCGAG 757209 Query 245470 CAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCACCTCATGAGGGTGTGCTG-GG 245528 | ||||||| ||| || ||| | |||| ||||||| ||||||| || Sbjct 757208 GACTCGCTCGATGTCGTCTCCCCAGATGCCGACGGCGACTCTCATGATCATGTGCTGAGG 757149 Query 245529 GCG-TC-TCGATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAA 245586 || || |||| || ||| | ||| | | || || ||||| || |||||||| Sbjct 757148 ACGCTCGACGATCTTACCGTCGAG---CTTCAAGAGATACGATCGCTCAAGAGTCTTGAA 757092 Query 245587 CCCAAAGTACGAGTAGCCAAAGTC 245610 || |||||| |||| ||||| Sbjct 757091 GCCGAAGTACTGGTAGTTGAAGTC 757068 >seq1 Length=5717297 Score = 417 bits (462), Expect = 2e-111 Identities = 612/853 (72%), Gaps = 32/853 (4%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGAC 42368 |||||||||||||| || ||| |||||||||||| ||||| |||||| |||||||| Sbjct 4504465 ATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCCGAAGAGATCGACCTGTCCAAGGAC 4504406 Query 42369 ACGGCCGGCTGGGAGTCACTGTCTGA----GAACGAAAAGTTTTTCCTCAAAAACATACT 42424 || || |||| | || | |||| | ||||||| | ||| || |||| || Sbjct 4504405 ACTCACGACTGGAACA-ACCGCCTGAACGAGGACGAAAAATACTTCATCTCCCACATCCT 4504347 Query 42425 GGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATGAA 42484 |||||||| ||||||||||| || || ||||| |||||||||| | |||| Sbjct 4504346 CGCCTTCTTTGCCGCCTCTGATGGAATTGTCAACGAGAACCTGGTTGAGCGATTCAGCGG 4504287 Query 42485 AGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAACGT 42544 |||||| ||| | |||||| || ||||||||||| |||||||| || |||||| | Sbjct 4504286 AGAGGTCCAGATCCCTGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGATGGAGAACAT 4504227 Query 42545 GCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAGCG 42601 ||||| ||| ||| || || |||| |||| |||||| ||| ||| | |||| Sbjct 4504226 CCACTCCGAGACCTACTCC---CTCCTCATTGACACCTACATCAAGGACACCGCCCAGCG 4504170 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | || ||||| ||| | || ||||| ||||||||| |||||||| || ||||| Sbjct 4504169 GACGCACCTCTTCAACGCCGTCGACACGATTCCCTGCATCCGCAAGAAGGCCGATTGGGC 4504110 Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 || ||||| | | | || | | || || | | || | || || |||||| ||| Sbjct 4504109 CCTGCGATGGATTTCG-GACAAGAACTCCACCTTTGCCCAGCGTCTCGTTGCCTTTGCCG 4504051 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779 |||||||||| |||||||| || || || || ||||| |||||||||||| || | Sbjct 4504050 CCGTCGAGGGTATCTTCTTTAGCGGTGCTTTTGCATCCATTTTCTGGCTCAAGAAGCGCG 4503991 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 || || |||||||| ||||||||||| ||||| |||||| | |||||||| || || Sbjct 4503990 GTCTC-ATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTCCAC 4503932 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899 | |||||||||||| ||| || |||| |||||| | || || |||||| | Sbjct 4503931 ACGGACTTTGCCTGTCTCTTGCACTCG---CACCTCCGCAACCGTGCCAGCAAGGAGTCG 4503875 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959 |||| ||||||||||| || ||||| | |||||| ||||||| | || || | ||| Sbjct 4503874 ATCCGAGCCATCATCACCGATGCCGTCGCCATCGAGCAGGAGTTTTTGACCGAGGCCCTG 4503815 Query 42960 CCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGC 43018 |||||| ||||| | ||||||||| | ||| ||| |||||||| ||| |||||| Sbjct 4503814 -CCGTGTGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACATCGAGTTCGTCGC 4503756 Query 43019 CGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACACGCCGTGCCC 43072 ||||| |||||| || | ||| || || |||||||| | | ||| Sbjct 4503755 CGACCGTCTCCT------CATCGCCCTCGGCAACGAGAAGATCTACAACGCCACCAACCC 4503702 Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132 ||||||||| |||||||||||||| | | |||||||||||||| || |||||||| || Sbjct 4503701 CTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTTGAGAAGCGTGT 4503642 Query 43133 CGCCGACTACCAG 43145 || ||||| ||| Sbjct 4503641 CGGTGACTATCAG 4503629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338857677040