Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1 118 2e-21 >seq1 Length=5717297 Score = 118 bits (130), Expect = 2e-21 Identities = 314/470 (67%), Gaps = 10/470 (2%) Strand=Plus/Minus Query 243289 TTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 243348 ||||| |||||||||| |||| | ||| || ||||| | ||| ||| ||| Sbjct 4504078 TTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCTTT- 4504020 Query 243349 TGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGA 243407 ||| |||| || ||||| ||| ||| | ||||| |||||| | || ||||| Sbjct 4504019 TGCATCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGA 4503960 Query 243408 GTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAAAGCT 243467 | ||||| ||| |||||||| || ||| | || | || || | || | || Sbjct 4503959 GCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGCCTGTCTCTTGCACTCGCACCT 4503900 Query 243468 CCAGAACAA-GCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAAAACG 243526 || ||| || | || || || || | |||||||| || || || | | || Sbjct 4503899 CCGCAACCGTGCCAGCAAG-GAGTCGATCCGAGCCATCATCACCGATGCCGTCGCCATCG 4503841 Query 243527 AAAAGGAATTCATTTG--CGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACT 243584 | |||| || |||| ||| || | || || || | ||||||||||| || Sbjct 4503840 AGCAGGAGTT--TTTGACCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAACTCCACCCT 4503783 Query 243585 CATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAA 243644 ||| ||||||||||| ||||| |||||||| | ||||||| || || | ||||| Sbjct 4503782 GATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCATCGCCCTCGGCAACGAGAA 4503723 Query 243645 AGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAAC 243704 | |||||| ||| |||||||| | ||| |||||| ||| || || || || || Sbjct 4503722 GATCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGAC 4503663 Query 243705 TAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATG 243753 |||||||| || ||||||||| |||| ||||| | | || ||||| ||| Sbjct 4503662 CAACTTCTTTGAGAAGCGTGTCGGTGACTATCAGAAGGCC-GGTGTCATG 4503614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879590211150