Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 159 4e-34 >seq1 Length=5717297 Score = 159 bits (176), Expect = 4e-34 Identities = 559/857 (65%), Gaps = 23/857 (3%) Strand=Plus/Plus Query 125759 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 125818 ||||| || || |||||||| |||||||| ||||| ||| | | | ||| |||||||| Sbjct 4503633 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATG 4503692 Query 125819 AAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGACG 125877 || || || ||||| | | ||| | || | | | || | | | ||||||||| Sbjct 4503693 AAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGAT-GAGGAGACG 4503751 Query 125878 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 125937 || | |||| |||| ||||||| |||| |||||||| || | ||| ||| Sbjct 4503752 GTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCACA 4503811 Query 125938 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTG 125997 || || || || | ||| ||| ||| || | ||||| || | |||||| | Sbjct 4503812 CGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTCG 4503871 Query 125998 AATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTG---AAGAGTTCCACGGCAAACTC 126054 || | ||| | | | ||||| | | | ||||| || |||||| || Sbjct 4503872 GATCGACTCCTTGCTGGCACGGTTGCGGAGGTGCGAGTGCAAGAGA--CA-GGCAAAGTC 4503928 Query 126055 TTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAG 126114 |||||||||||||||||| |||||||| || || |||||| || || |||||||| Sbjct 4503929 CGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAG 4503988 Query 126115 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||||| | ||||||||| | ||| | ||| |||||||| ||||| || Sbjct 4503989 ACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGAC 4504048 Query 126175 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTT 126231 || || |||| |||||||| ||||||| | || || |||| || ||| Sbjct 4504049 GGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTG---GAGTTCTTGTCCGAAATCCATCG 4504105 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291 || ||||| | ||||| || ||| || || | || | || || | ||||| | Sbjct 4504106 CAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTG 4504165 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 | || | | | || |||||||| | || ||||| || || || ||| ||| Sbjct 4504166 CGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTG 4504225 Query 126352 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410 || | | ||| || | ||| | ||||||| | || || || ||||| |||| Sbjct 4504226 GATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCT 4504284 Query 126411 CATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 126469 | || || ||| | | | | ||||| ||||||||||| || | ||||| || Sbjct 4504285 C-TCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAG 4504343 Query 126470 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 126526 || ||||| | ||||| | | ||| | |||||||| || | |||||||||| | Sbjct 4504344 GCGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGTGA 4504403 Query 126527 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA-ATTGCTCATTTGAGCCTTCTTATA 126585 ||||| || || || | ||| || || ||||| | || | | |||||||| || Sbjct 4504404 GTGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCG-GCCTTCTTGTA 4504462 Query 126586 GAGTTCCCAAAGGTGGG 126602 | || ||||| |||| Sbjct 4504463 CATTTGCCAAATCTGGG 4504479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353383459320