Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 360 2e-94 seq1 150 2e-31 seq9 116 4e-21 seq3 93.3 4e-14 >seq8 Length=1130364 Score = 360 bits (398), Expect = 2e-94 Identities = 1029/1557 (66%), Gaps = 59/1557 (4%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || || || || |||| ||||||| | || | ||| ||| ||| Sbjct 758568 GGTTGACGACCTGGAATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAG 758509 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| ||||||| ||||| || || || | ||| | |||||||||||| ||| | Sbjct 758508 GCTCGAAGCATTCGTTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGA 758449 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 ||| ||| || || | ||||||| | || | |||||||| | | ||| |||| Sbjct 758448 CCAGCAAGCTGTTGCGGAGGCCGTGCTCCTTGATCTGCTCCTTCAAGGAGTCCCACTCCC 758389 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACT--CCTC-GACTGGCGG 153264 |||| | ||||| | ||| ||||||||||||||| || | | |||| || ||| | Sbjct 758388 ACAGGTCGGACGGCTTGACGTCCCACATGTCGTACTG-AAGAATGCCCTCCGA--GGCAG 758332 Query 153265 GACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGA 153324 || || |||| ||| ||| ||| | ||| | || | ||||||| Sbjct 758331 GAGATCCCTTGAACGATGAATAGGGGCCTTCGACCTTGGCGATCTCCATGGAGGCCTCGA 758272 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCT 153384 | | | | ||| ||||| ||| ||| | || || || || || || | || Sbjct 758271 GAGATGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAGCTCGCGAGCCTCGGGGGACT 758212 Query 153385 CGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 || | ||||| ||||| | ||||||||||| |||||||| | |||||||||||||| Sbjct 758211 CGAAAGGCATTCGCAGGGCAAGGAAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGG 758152 Query 153445 GTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATCGAT 153502 | || || | ||||||| || || ||| || | || ||||| || ||||| Sbjct 758151 GGCGGTGGCGCATGTTGCTGTTCCAGGC-CTC-CTGGACCGGGTAGTGGTTCACGTCGAT 758094 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 ||| ||||||||||||| || || || || || | | | | || |||| ||| ||||| Sbjct 758093 GATTCTGTTGAGGTTGCGAACGACGACCTTGGTGACCTCGTGGAGCTTCTGGAAGTCATA 758034 Query 153563 GG-----TCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACA 153616 | ||||| | ||||||| | | || || ||| | |||||||| || || Sbjct 758033 GCAGCCCTCATTGTAGTCGACGAATGC----CGG--CAGGGCCAGGGACGCCAGGTTGCA 757980 Query 153617 GACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTT 153676 ||||||| ||| |||| | || ||||| | |||||||| |||||||||| || Sbjct 757979 GACGGCCACCTCGTCGGGGGCGGAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCG 757920 Query 153677 TATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTA 153736 || || | || | ||| ||||| || | ||||| ||||| ||| | |||||| | Sbjct 757919 GATCGTTCCTAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGAA 757860 Query 153737 CGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGCTCGCAC 153796 || ||||||||| || | |||| ||| | ||| | |||||| || | Sbjct 757859 GGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGATGGAGTACCACAGCTTCTGCGCACGAAT 757800 Query 153797 CCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCC 153856 || || |||||||| | ||||| |||||||| ||| ||||| | ||| Sbjct 757799 GGTCTTGCGGCCACGGCCCTCCTTTTCGTACTTTTCGTACAGGGCCTCGAACTCTTGGCC 757740 Query 153857 GTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGC 153916 ||||||||||||||||||||| || | | || ||||| |||| ||| |||| Sbjct 757739 GTAGCAGTCGGCGAGGCCGGGGCATTCGTTGGGGCACATGAGCGTCCA------GTCGAG 757686 Query 153917 GTT------GACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCG 153970 ||| ||| || |||||| ||||| || | |||||| || | ||||| || Sbjct 757685 GTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTCCCG 757626 Query 153971 CGCCTTGCAATCCTCCGCGCCCATG----TTGCGTTTCAGATTGA-GCACGCTATAGATG 154025 || | |||||| | ||||| ||||| || | || | || | | ||| | Sbjct 757625 GGCACGGACCTCCTCCTTG-CCATGGTTCTTGCG---CAAGTCGAGGAACTCGA-AGACG 757571 Query 154026 TCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGA 154082 |||||||||||||| |||| ||||| || | ||| || ||| || |||||||| Sbjct 757570 TCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCCGGGGCGCTTGTTGCCGCCCTGG 757511 Query 154083 TCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTG 154142 ||||||| | | | |||||| ||||||| | |||||| | |||| | | ||| Sbjct 757510 TCGACGTATCTGGCGGTGTTGTTGTAGACGCGGAGCATGGGAATAATGCCGTTGGAGGTT 757451 Query 154143 CCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATG 154202 || ||||| ||| | | ||| ||| || | | || ||||| | || ||| Sbjct 757450 CCATTGGTTCCGGCGATATAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACCGATG 757391 Query 154203 CCGCC-GCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGA 154260 || || ||| | ||| || || ||||| ||| || || ||||||||| |||| Sbjct 757390 CCACCAGCCAT-CTTGGAGATCATGGCGCACGTC-TTGAGGGTGTCGTAGATGCCCTCGA 757333 Query 154261 TGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCG 154320 |||| ||||| | | ||| |||||| ||||| ||| || | | | ||||| | Sbjct 757332 TGCTGTCGTCCTTCATGTCGACCAAGAAGCACGAGGACAGCTGGGCCTGGGGGGTTCCGG 757273 Query 154321 CCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCG---GTACG 154377 | |||||||||||| ||||||||| || | || ||| |||| | ||| | Sbjct 757272 CGTTGAAGAGGGTGGGAGACGCGTGCGTGAAGAACTT---GCTGGACATGAGATTGTATG 757216 Query 154378 TTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGT 154437 | |||| | | ||||| || || || ||||||| ||||| | ||||| ||||| Sbjct 757215 TCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATGCCGACGGCGACTCTCATGATCATGT 757156 Query 154438 GCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCAT-TTTCGAGGGTT 154496 |||| ||||| ||| ||| || ||| | |||||||||||| | || || || || Sbjct 757155 GCTGAGGACGCTCGACGATCTTACCGTCGAGCTTCAAGAGATA-CGATCGCTCAAGAGTC 757097 Query 154497 TTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGCCGCATCGAGC 154553 ||| | ||||| |||| ||| | || || ||| | ||||||| | |||||| Sbjct 757096 TTGAAGCCGAAGTACTGGTAGTTGAAGTCCCTCTCGTAGACGATGGCGGAGTCGAGC 757040 >seq1 Length=5717297 Score = 150 bits (166), Expect = 2e-31 Identities = 505/765 (66%), Gaps = 21/765 (3%) Strand=Plus/Minus Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145 ||||| ||||| || || ||| ||| | | || ||||| |||||| | ||| | Sbjct 4504381 AACGAGGACGAAAAATACTTCATCTCCCACATCCTCGCCTTCTTTGCCGCCTCTGATGGA 4504322 Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204 || || ||| ||||| | ||| || ||||||| | ||| || | | ||||| | Sbjct 4504321 ATTGTCAACGAGAACCTGGTTGAGCG-ATTCAGCGGAGAGGTCCAGATCCCTGAGGCCCG 4504263 Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264 | ||| || ||| || | | || ||| | | ||| | |||| ||| || || Sbjct 4504262 GTGCTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCT 4504203 Query 52265 CATTGAGCAGCTG-ATAAAAGATGAGCACGAGCGCGACACGCTGCTG-AATGCGTTCGAG 52322 |||||| || || || || || | |||| ||| | | || || || |||| Sbjct 4504202 CATTGA-CACCTACATCAAGGACACCGCCCAGCG-GACGCACCTCTTCAACGCCGTCGA- 4504146 Query 52323 CACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC 52381 |||| | || ||| | ||||| ||||| | ||||| || ||||| | | | | Sbjct 4504145 CACGATTCCCTGCATCCGCAAGAAGGCCGATTGGGCCCTGCGATGGATTTCGGACAAGAA 4504086 Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441 | |||| | ||| |||| | || ||||| ||| |||||||| | || ||| ||| Sbjct 4504085 CTCCACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGG 4504026 Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501 ||||| |||| || | | || | | || | ||||||||||| || ||| Sbjct 4504025 TGCTTTTGCATCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTC 4503966 Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAA 52561 ||||||| | || || || ||||| || || |||||||||||||| || |||| || Sbjct 4503965 CAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGCCTGTCTCTTGCACT- 4503907 Query 52562 GACGCGCGTGACCGAAAAATTGGATTC--GGACACGATCCTGAGC-ATGTTCAAGGAGGC 52618 ||| | | ||| || || | ||| |||||| |||| || ||| || || Sbjct 4503906 --CGCACCT--CCGCAACCGTGCCAGCAAGGAGTCGATCC-GAGCCATCATCACCGATGC 4503852 Query 52619 GGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAA 52678 || || ||||| |||||||||| || | || |||||| | |||||||||||||| Sbjct 4503851 CGTCGCCATCGAGCAGGAGTTTTTGACCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAA 4503792 Query 52679 CGCGCAGTCC-ATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCG 52737 | | || | ||| ||||||||||||| || || || ||||| | | |||| Sbjct 4503791 CTC-CACCCTGATGAAGCAGTACATCGAGTTCGTCGCCGACCGTCTCCTCATCGCCCTCG 4503733 Query 52738 GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTT 52796 | || | | ||| || |||||| ||| || || || || ||| | ||||| || || Sbjct 4503732 G-CAACGAGAAGATCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTC 4503674 Query 52797 GAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 | |||||||||||||| || |||||||| ||||| || ||| || Sbjct 4503673 GGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTATCAG 4503629 >seq9 Length=1038790 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||| || || ||| || ||||||||||| || || | | Sbjct 526785 GACTCCTTCTGGATGTTGTAATCCGACAAAGTGCGGCCATCCTCGAGTTGCTTGCCAGCA 526726 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| || || || ||||| ||||| || || || ||||| ||| || || | | Sbjct 526725 AAGATGAGGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACA 526666 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 |||| | | |||||||| |||||||||||||| || | || || || |||||||| || Sbjct 526665 TTGT-CAATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTCTT 526607 Query 138600 TACAAAAATCTGCATGGC 138617 || || ||||||||||| Sbjct 526606 GACGAAGATCTGCATGGC 526589 Score = 114 bits (126), Expect = 1e-20 Identities = 144/194 (74%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||||||| || || ||| ||||| || ||||| | | Sbjct 527570 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCGAGCTGCTTACCAGCGAA 527511 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| || ||||| || || ||||| || ||||| ||||| ||| | || | ||||| | Sbjct 527510 GATAAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTC-CTGAATCTTCGATTTAACGT 527452 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||||| | || || ||||||| || | |||||||| |||| || || Sbjct 527451 TG-TCGATGGTGTCGCTTGATTCGACCTCGAGGGTAATGGTTTTACCCGTCAAGGTCTTG 527393 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 527392 ACGAAGATCTGCAT 527379 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || | ||| | | | |||||||| || |||||||||||| Sbjct 527149 CCACCACGCAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 527090 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| |||| |||||||| ||||| ||||| Sbjct 527089 AGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 527030 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| || || | |||| || | |||||||| ||||| || Sbjct 527029 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACATTG-TCGATGGTGTCGGAGGACTCGAC 526971 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 ||||| || | |||||||| || ||||| || || Sbjct 526970 CTCGAGGGTGATTGTTTTACCCGTGAGAGTCTTGAC 526935 >seq3 Length=3706406 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || || |||| Sbjct 1555215 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCG 1555156 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| ||||| || || || || || ||||| ||| || || | Sbjct 1555155 AAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 1555096 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | ||| || || || || || || Sbjct 1555095 TTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 1555036 Query 138601 ACAAAAATCTGCAT 138614 || ||||||||||| Sbjct 1555035 ACGAAAATCTGCAT 1555022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262220104880