Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 214 2e-50 seq3 111 1e-19 seq9 107 2e-18 seq7 96.9 3e-15 >seq8 Length=1130364 Score = 214 bits (236), Expect = 2e-50 Identities = 1006/1557 (65%), Gaps = 68/1557 (4%) Strand=Plus/Minus Query 146038 TCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGC 146097 || || ||| |||||| || | ||||||| ||||| || || ||||| || || || Sbjct 758593 TCAACCAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAATTCACCGGCCAGGACTCGT 758534 Query 146098 CTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCC 146157 | | | || | |||| ||| | |||||||| | |||||||| ||||| ||||||| Sbjct 758533 CGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCATTCGTTGTTGCCGAGGATCTGCGAG 758474 Query 146158 GTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTG-TCTTTGAAT 146216 || | ||||| |||||| ||| |||||||| ||| | | |||||| || |||| | Sbjct 758473 GTGCTGGCGGTCGGCATGGGCGCGACCAGCAAGCTGTTGCGGAGGCCGTGCTCCTTGA-T 758415 Query 146217 CTTTTCCCGTAGTTTGGACCAATTCCACAAATGATCCGTGGGATAGATATTGTAGTTGTC 146276 || ||| | | ||| | ||||| | || | || | || | | |||| Sbjct 758414 CTGCTCCTTCAAGGAGTCCCACTCCCACA---GGTCGGACGGCTTGACGTCCCACATGTC 758358 Query 146277 GTAATGCATAGTGCCG--CGGAACAGGGGGCTATTC-TCGTACGATTCATAAGGACCGTC 146333 ||| || | | |||| || |||| | || | | | ||||| ||| || || || Sbjct 758357 GTACTGAAGAATGCCCTCCGAGGCAGGAG---ATCCCTTGAACGATGAATAGGGGCCTTC 758301 Query 146334 GATCTTGGCCAGTTCGCAGCTAGCTTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCAT 146393 || |||||| | || | || || |||| | ||| |||||||| |||| | Sbjct 758300 GACCTTGGCGATCTCCATGGAGGCCTCGAGAGATGCGTGGTAGATGGTCTCGAAGATCTT 758241 Query 146394 GTAGTTGACGCTCCTG-GCCTCCTCGCTGTCGTAGGGGATATCGAGAAGCACA-AAGGCG 146451 | ||| | |||| | ||||| | ||| | || || ||| ||| |||||| Sbjct 758240 CTTGTTCA-GCTCGCGAGCCTCGGGGGACTCGAAAGGCAT-TCGCAGGGCAAGGAAGGCG 758183 Query 146452 TCGGCGAGACCCTGTATCCCGACACCAACGGGGCGGTGTTTCTTGTTACTGTTCGCAG-- 146509 |||||||||||||| | ||||| || | ||||||||| | |||| |||||| ||| Sbjct 758182 TCGGCGAGACCCTGCACACCGACGCCGATGGGGCGGTGGCGCATGTTGCTGTTC-CAGGC 758124 Query 146510 CGCCCGCAGTGGGATAGTGGTTGCTGTCGATGATCTTGTTGAGATTACGCACGACAATTT 146569 | || | | ||| |||||||| ||||||||| ||||||| || || ||||| | | Sbjct 758123 CTCCTGGACCGGG-TAGTGGTTCACGTCGATGATTCTGTTGAGGTTGCGAACGACGACCT 758065 Query 146570 TCGTCA------AACGATTCAGCAGGACATAGTCAAATGTTTTAGTTTTAACGTTGACGC 146623 | || | | ||| | | | ||||| || | | || || || |||| Sbjct 758064 TGGTGACCTCGTGGAGCTTCTGGAAGTCATAG-CA---GCCCTCATTGTA--GTCGACGA 758011 Query 146624 ACTTGTTG--ACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATA 146681 | || | | ||| | || |||| ||| || ||||| |||||| | || | || Sbjct 758010 A--TGCCGGCAGGGCCAGGGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTA 757953 Query 146682 CTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACT 146741 || | ||||||| |||||||||| || ||| | || | || || ||||| || Sbjct 757952 CTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCT 757893 Query 146742 AAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTC 146801 | ||||||||| ||||||||| |||||| | || ||||| || | || ||| Sbjct 757892 CTTCCTGTTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTC 757833 Query 146802 GACGATGAATCTAAACAAATCTCTGGCCTTTACTTGTCTTTCGTACA-GTTTATTCTTTT 146860 || |||| | ||| | |||| | | | ||||| || || | | ||||| Sbjct 757832 GAGGATGGAGTACCACAGCT-TCTGCGCACGAATGGTCTTGCGGCCACGGCCCTCCTTTT 757774 Query 146861 CGTATTTCTCGTACAATATTTC-AAAACTAGAACCGTACTCGTCGAGGAGGCCGGGATAC 146919 |||| || ||||||| || || || | ||||| |||| ||||||||| | Sbjct 757773 CGTACTTTTCGTACAGGGCCTCGAACTCTTG-GCCGTAGCAGTCGGCGAGGCCGGGGCAT 757715 Query 146920 TTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAACAAATCG 146979 | ||||| || | |||| ||| || |||| || || || | ||| || | |||| Sbjct 757714 TCGTTGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCGACACGCTTCATGAAGAGATCG 757655 Query 146980 GGAATCCAAAGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCATGTTGCGT 147039 || ||||| ||| |||| | || ||| || || | | ||||| | ||||| | | | Sbjct 757654 GGGATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACCTCCTCCTTG-CCATGGTTCTT 757596 Query 147040 -CTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGGCGAGTGC 147098 | ||||| ||||| ||| | | || | ||||| ||||| | ||| |||| || Sbjct 757595 GCGCAAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGC 757536 Query 147099 GCCTTTTCGC---TTACCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGACTCGTAA 147155 ||| ||| || |||||||| ||||||| | | |||| ||| |||| || | Sbjct 757535 GCCGGGGCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCGGTGTTGTTGTAGACGCGGAG 757476 Query 147156 CATGGACACGAGGCCGCCGGATTTT---GTGGTGCCGTTG-TATTG--------AGCGCT 147203 ||||| | | |||| ||| || |||| ||| | ||| | || | Sbjct 757475 CATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATAGGAGCCAGTGGCACG 757416 Query 147204 GACGCTTTGCACGCTCAGCCCGAGACCTCCGCCCAGATTCGAAATCAAAGCGGAC-TCGT 147262 || || || ||| |||| |||| || || ||| || || |||| ||| || || | Sbjct 757415 GATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCGCACGTCTT 757356 Query 147263 GCAAGGTCTTGTAGATGCCGTCGATGCTGTCTTCCTTGATGCATTGCAGGAAACACGAAC 147322 | | ||| | ||||||||| ||||||||||| ||||| ||| || ||| ||||| Sbjct 757355 G-AGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCACGAGG 757297 Query 147323 ACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCGTGCGT---GAACG 147379 ||| |||| | || || || || || ||||| |||||||| |||| Sbjct 757296 ACAGCTGGGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGAAGAACT 757237 Query 147380 TGCCCAGACTCATCA-ATTGATACGTTTCAATGGCGCTCATAACGTCATCGCCGTGAATG 147438 || | || ||| | |||| || || || | | | | | | ||| || || ||| Sbjct 757236 TG-CTGGA--CATGAGATTG-TATGTCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATG 757181 Query 147439 GCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCACGTCATTGACTTTT 147498 | | |||||| | ||||| ||||||||| || || || | ||| | | || || Sbjct 757180 CCGACGGCGACTCTCATGATCATGTGCTGAGGACGCTCGACGATCTTACCGTCGAGCTTC 757121 Query 147499 AATAGATATCCATTGGTC-AGAGTTTTGAAACCAAAGTACTTGTAGTCGTAGTCCCT 147554 || ||||| | || | || ||||| ||||| || ||||||| ||||| | ||||||| Sbjct 757120 AAGAGATA-CGATCGCTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCCCT 757065 >seq3 Length=3706406 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | ||||| ||| || ||||| || || Sbjct 1555218 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 1555159 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| ||||| || ||||||||||||||| ||| || |||| Sbjct 1555158 GCGAAGATGAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1555099 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | ||||| ||| |||||| | | ||| || || | ||| | ||| || || || || || Sbjct 1555098 ACGTTGT-CGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGT 1555040 Query 127096 TTTTACAAAAATCTGCAT 127113 || || ||||||||||| Sbjct 1555039 CTTGACGAAAATCTGCAT 1555022 >seq9 Length=1038790 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || ||||| |||| || |||||| || || ||||| || |||||| | Sbjct 527570 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCGAGCTGCTTACCAGCGAA 527511 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTT 127040 ||| | ||||||||||| ||||| ||||| ||||||||| || ||| || | ||| Sbjct 527510 GATAAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGAATCTTCGATTTAACGTT 527451 Query 127041 GTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 127100 | |||| |||||| | ||||| |||| ||| | ||||| || |||| || || | Sbjct 527450 G-TCGATGGTGTCGCTTGATTCGACCTCGAGGGTAATGGTTTTACCCGTCAAGGTCTTGA 527392 Query 127101 CAAAAATCTGCAT 127113 | || |||||||| Sbjct 527391 CGAAGATCTGCAT 527379 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || |||||||| || ||||| ||| || || || || ||| Sbjct 526788 GTGGACTCCTTCTGGATGTTGTAATCCGACAAAGTGCGGCCATCCTCGAGTTGCTTGCCA 526729 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || |||| | || ||||| || ||||| ||||||||||||||| ||| || ||| Sbjct 526728 GCAAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTC 526669 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | || | |||||| | ||| || |||| ||| | || || ||||||||||| Sbjct 526668 ACATTGTCAATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGAGTC 526609 Query 127097 TTTACAAAAATCTGCATGGC 127116 || || || ||||||||||| Sbjct 526608 TTGACGAAGATCTGCATGGC 526589 Score = 104 bits (114), Expect = 2e-17 Identities = 134/185 (72%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || || || ||||| ||| | || || || || ||||| ||||| Sbjct 527119 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCG 527060 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||||| |||||||| |||||||| |||||||||||||| ||| ||| |||| Sbjct 527059 GCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTG 527000 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| |||||| | |||||| |||| ||| | ||||| || || ||||| Sbjct 526999 ACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGATTGTTTTACCCGTGAGAGTC 526940 Query 127097 TTTAC 127101 || || Sbjct 526939 TTGAC 526935 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| |||| || | || || || || ||||| ||||| ||| Sbjct 527377 CCACCACGCAGACGCAGGACCAGGTGCAATGTCGATTCCTTCTGAATGTTGTAGTCGGAG 527318 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || | ||| || || ||| | ||||||||||||||||| || || Sbjct 527317 AGGGTCCGACCGTCTTCCAACTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGGGGA 527258 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| || || ||||| |||| |||| ||||||| ||| || Sbjct 527257 ATACCCTCCTTGTCTTGAATCTTGGACTTGACGTTG-TCGATCGTGTCCGATGACTCAAC 527199 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || ||||| |||| || || || || |||||||| Sbjct 527198 CTCGAGCGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 527151 >seq7 Length=1181343 Score = 96.9 bits (106), Expect = 3e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || || ||| |||||||||||||||| ||||| || ||||||||||| Sbjct 1039517 ATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGGGGGATGCCCTCCTT 1039576 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 |||| ||| || ||||| | |||| ||||||| |||||| |||| ||| | Sbjct 1039577 GTCCTGGATCTTGGACTTGACATTGTCGATCGTGTCCGAGGACTCGACCTCGAGGGTAAT 1039636 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAA 127105 || || || || || || || || ||| Sbjct 1039637 GGTCTTACCCGTGAGGGTCTTCACGAAA 1039664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500627630960