Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8 208 9e-49 seq1 159 4e-34 seq3 95.1 1e-14 >seq8 Length=1130364 Score = 208 bits (230), Expect = 9e-49 Identities = 882/1369 (64%), Gaps = 43/1369 (3%) Strand=Plus/Minus Query 115876 AACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCA 115935 || ||||| || ||| |||| | | |||||||||| |||||| ||||| ||||| || Sbjct 758554 AATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCATTCG 758495 Query 115936 TTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTG 115995 ||||| || | ||| || | ||| ||| || |||||||| || | || | ||||||| Sbjct 758494 TTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACCAGCAAGCTGTTG 758435 Query 115996 CGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GTTGAGCTTT 116052 ||||| || | || | || | ||||| | || |||||| || | || | | Sbjct 758434 CGGAGGCCGTGCTCCTTGATCTGCTCCTTCAAGGAGTCCCACTCCCACAGGTCGGAC--- 758378 Query 116053 GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAAT 116112 | || | |||||||| || |||| || || || | || || || ||||||| || Sbjct 758377 GGCTTGACGTCCCACATGTCGTACTGAAGAATGCCCTCCGAGGCAGGAGATCCCTTGAAC 758318 Query 116113 GTCTCATATGGGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGA 116169 | ||| ||||| || |||| || | || |||| |||||||| | |||||| Sbjct 758317 GATGAATAGGGGCCTTCGACCTTGGCGATCTCCATGGAG---GCCTCGAGAGATGCGTGG 758261 Query 116170 TACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGA 116229 || || ||||| || || |||| | |||||| ||| || || | | Sbjct 758260 TAGATGGTCTCGAAGATCTTCTTGTTCAGCTCGCGAGCCTCGGGGGACTCGAAAGGCATT 758201 Query 116230 CGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289 || || || | || |||||||| || ||||||| ||| || ||||| || | | Sbjct 758200 CGCAGGGCAAGGAAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGGGGCGGTGGCGC 758141 Query 116290 ATATTAGACTTTCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTT 116346 || || | ||| | || |||| || || || ||| ||||| | || || Sbjct 758140 ATGTT-GCTGTTCCA--GGCCTCCTGGACCGGGTAGTGGTTCACGTCGATGATTCTGTTG 758084 Query 116347 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC 116406 || || ||| ||||| |||| || || ||||| | | | ||| | | || Sbjct 758083 AGGTTGCGAACGACGACCTTGGTGACCTCGTGGAGCTTCTGGAAGTCATAGCAGCCCTCA 758024 Query 116407 TCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCC 116466 | | | ||| | || ||||| | |||||||| || || || | ||| || Sbjct 758023 TTGTAGTCGACGAATGCCGGCAGGGCCAGGGACGCCAGGTTGCAGACGGCCACCTCGTCG 757964 Query 116467 TTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTC 116526 | | |||||| || || || || || | || || || || || || | |||| Sbjct 757963 GGGGCGGAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTC 757904 Query 116527 TTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCC 116586 || || || ||| |||| || || |||||||| ||||| | || | || |||||| Sbjct 757903 TTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCC 757844 Query 116587 GTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCAC-AGTGGCGTT---GGC 116642 || |||| || ||| || | | || ||| | | || |||| | ||| || | | Sbjct 757843 GTCTGGGCCTCGAGGATGGAGTACC--ACAGCTTCTGC--GCACGAATGGTCTTGCGGCC 757788 Query 116643 TCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTG 116701 || ||||||| ||||||||| ||| |||||||| ||||||| || ||| || | Sbjct 757787 ACGGCCCTCCTTTTCGTACTTTTCGTACAGGGCCTCGAACTCTT-GGCCGTAGCAGTCGG 757729 Query 116702 AGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGC 116760 ||| || || || || | || || | ||| | ||| | || ||| || ||| Sbjct 757728 CGAGGCC-GGGGCATTCGTTGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCGACACGC 757670 Query 116761 TTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCA 116820 ||||||||||| || ||||||||||| ||| ||| || ||||| || | || || Sbjct 757669 TTCATGAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACCTCCTCC 757610 Query 116821 TCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGG 116880 | || || || ||||| || | || || | || || |||||||| || || ||| Sbjct 757609 TTGCCATGGTTCTTGCGCAAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGG 757550 Query 116881 TACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCG 116937 || | |||| | || ||| || |||||| || || || || || | Sbjct 757549 TAGATTGCGAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCGGTGTTG 757490 Query 116938 TTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTG-TCCCCCGA-ATAC 116995 || | ||||| ||||| ||||| || || | || ||||| | ||| ||| ||| Sbjct 757489 TTGTAGACGCGGAGCATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATAG 757430 Query 116996 GAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 ||| | |||| | || ||||| || || ||| || || || ||| ||| |||| Sbjct 757429 GAGCC--AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGA 757372 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | |||||| | |||| || ||||||| || ||||| ||| |||| | ||| Sbjct 757371 TCATGGCGCACGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGA 757312 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTC 117174 | |||||| |||| || ||||| || || || |||||||||||||| || | | Sbjct 757311 CCAAGAAGCACGAGGACAGCTG-GGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGAC 757253 Query 117175 GCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGAC 117221 ||||| ||| | | |||| |||||| || ||| ||||| | ||| Sbjct 757252 GCGTGCGTGA--AGAACTTGCTGGACATGAGATTGTATGTCTCGAGGAC 757206 >seq1 Length=5717297 Score = 159 bits (176), Expect = 4e-34 Identities = 534/815 (66%), Gaps = 21/815 (3%) Strand=Plus/Plus Query 127232 TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATA 127291 ||||| ||||| |||||||| |||||||| ||||| || ||||| ||| |||||||| Sbjct 4503633 TAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATG 4503692 Query 127292 AAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGACG 127350 || || || ||||| | | ||| | || | | | || | | | ||||||||| Sbjct 4503693 AAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGAT-GAGGAGACG 4503751 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 || | |||| |||| ||||||| |||| |||||||| || | ||| ||| Sbjct 4503752 GTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCACA 4503811 Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470 || || || || | ||| ||| ||| ||| | || || || | |||||| | Sbjct 4503812 CGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTCG 4503871 Query 127471 AATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTG---AAGAGTTCCACAG-CAAACT 127526 || | ||| | | | ||||| | | | ||||| |||| |||| | Sbjct 4503872 GATCGACTCCTTGCTGGCACGGTTGCGGAGGTGCGAGTGCAAGAG----ACAGGCAAAGT 4503927 Query 127527 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 127586 | |||||||||||||||||| |||||||| || || |||||| || || ||||||| Sbjct 4503928 CCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 4503987 Query 127587 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 127646 |||| |||||||| | ||||||||| | ||| | || |||||||| ||||| | Sbjct 4503988 GACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGA 4504047 Query 127647 CACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTC 127705 | || || |||| ||||||| |||||||| | | | |||| ||| ||| | Sbjct 4504048 CGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTG-GAGTTCTTGTCCGAAATCCATCGC 4504106 Query 127706 ATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCC 127765 | ||||| | ||||| || ||| || || | || | || || | ||||| | | Sbjct 4504107 AGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGC 4504166 Query 127766 TTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGG 127825 || | | | || |||||||| | || ||||| || || || ||| |||| Sbjct 4504167 GTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGG 4504226 Query 127826 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 127884 | | | ||| || | ||| | ||||||| | || || || ||||| ||||| Sbjct 4504227 ATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTC 4504285 Query 127885 ATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 127943 || || ||| | | | | ||||| ||||||||||| || | ||||| || | Sbjct 4504286 -TCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGG 4504344 Query 127944 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGA 128000 | ||||| | ||||| | | ||| | |||||||| || | |||||||||| || Sbjct 4504345 CGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGT-GA 4504403 Query 128001 G-ATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | ||||| || || || | ||| || || ||||| Sbjct 4504404 GTGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCA 4504438 >seq3 Length=3706406 Score = 95.1 bits (104), Expect = 1e-14 Identities = 195/288 (68%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 175925 GCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATA 175984 ||||| |||||| ||| | || ||||| | ||||| |||| | || | ||||||| Sbjct 2656314 GCATCGGAGCCACCGGCGAGCCTCGAACCAAAGTTACCACTTGGCACCAGAACATTGATA 2656373 Query 175985 TTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 176044 |||||||| || | | |||| | |||| || || || | | |||||||||||| Sbjct 2656374 TTGTTTGATCCGACAAAGTCCTGAGCCATACCGATGATTGTCTGCTGGAGGGAGACTTCG 2656433 Query 176045 CCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCA 176104 || || ||||| || | || | | || || | ||||| ||| ||||| || Sbjct 2656434 CCATGGTGGTAAGCGGTCTGCTGAGAAACGTAACCGTGCAACTCCGCGACCTTGAT---G 2656490 Query 176105 TCCTTGA----GGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAG 176160 ||||||| | ||| | | ||| || || |||| ||| || | ||| |||||||| Sbjct 2656491 TCCTTGACTCTGTTTCCT-TTGAAACAGGCGTACAGGACTTTGCGCTGACCAGGCTTGAA 2656549 Query 176161 GCCGTCGGCCATGTGTGCGATGGAACGCTTCAAGTCTGCCAAGCTGAA 176208 |||||| |||| | |||||| ||| | ||| |||| |||||| Sbjct 2656550 ACCGTCGATCATGGACGGGATGGATCGCATGTTGTCGGCCATGCTGAA 2656597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506977603640