Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 190 3e-43 seq8 150 3e-31 >seq1 Length=5717297 Score = 190 bits (210), Expect = 3e-43 Identities = 530/802 (66%), Gaps = 17/802 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||| || |||||||||||||| | | ||| || |||||||| |||| ||||| Sbjct 4503647 CTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTT 4503706 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | ||| ||| |||| ||||| || || | | ||| || || || || Sbjct 4503707 GGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGATGAGGAGACGGTCGGCGACGAACTC 4503766 Query 159769 GATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| || | |||| | |||| || |||||||| | || || || || | Sbjct 4503767 GATGTA-CTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCACACGGCAGGGCCTCGG 4503825 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT--CTGCGA--GACACGTTCG 159883 || |||||||| ||| || |||| || ||||| | || || || ||| | || Sbjct 4503826 TCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTCGGATCGACTCCTTGC 4503885 Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | | ||| |||| | ||| | || ||| || |||||||| ||| || Sbjct 4503886 TGGCACGG-TTGCGGA------GGTGCGAGTGCAAGAGACAGGCAAAGTCCGTGTGGAGA 4503938 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 |||||||| |||||||||| ||||||||| | | ||||||| ||||||| || ||| Sbjct 4503939 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTC 4503998 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 |||||||| ||||||| ||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct 4503999 TTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGACGGCGGCAAAG 4504058 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || ||||| | || |||| | || ||| |||| |||| | |||||| || Sbjct 4504059 GCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAATCCATCGCAGGGCCCAATCG 4504118 Query 160124 GCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACA-ATCTGTCCTGCTCCTT 160182 |||||||| |||||| || || ||||||||||| || | | |||| ||| Sbjct 4504119 GCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGCGTCC-GCTGGGC 4504177 Query 160183 CACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGAT 160242 |||||||| || |||| || ||||| | || | ||| | || || || Sbjct 4504178 GGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCAT 4504237 Query 160243 GGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCT 160302 ||||| || |||||| | ||||| | ||| ||||| |||| | Sbjct 4504238 CATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTCTCCGCTGAATCG 4504297 Query 160303 TTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGA 160362 | | |||| || | || || | || || | ||| |||||||| || | | ||| || Sbjct 4504298 CTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGGCGAGGATGTGGGA 4504357 Query 160363 GATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGT-GTGTCACGTCTTGGGCCA 160421 |||||| | | | ||||| | ||| || | || | ||||| ||| ||| | || || Sbjct 4504358 GATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGTG-AGTGTCCTTGGACA 4504416 Query 160422 AATCAACCTCTTCCGCGCTCCA 160443 || | |||||| ||| |||| Sbjct 4504417 GGTCGATCTCTTCGGCGGTCCA 4504438 >seq8 Length=1130364 Score = 150 bits (166), Expect = 3e-31 Identities = 393/583 (67%), Gaps = 20/583 (3%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897 || ||| || |||||||| |||| | | | |||| ||||| | | || |||||||||| Sbjct 758915 CTGGTCGACTGTGAACTGGATGGGGGCCGCAGCAG-CCTGCGTGCGTAGGTAGTACATGC 758857 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| ||||| || ||| ||| | ||||||| | | |||| || | | | Sbjct 758856 CCGTCTTGAGGCCGAGCTTCCAGCCGGTGAAGTGCATGCTCGTGATCTTGCCCATGGTCG 758797 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 |||| |||||| ||||| || ||||| ||||||||||| |||||| || || ||| Sbjct 758796 GGTCCTTCATGTGGATGTTGAGGGACTGAGACTGGTCGATGAA-GGCGCCGCGGTCCGCG 758738 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | || || ||| || |||||||||||||||||| ||| || || || | Sbjct 758737 GCCATCTGGACGATCTGGCGCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCT-TGAT 758679 Query 204076 GTGTTGAGGC--ACATCTT-CCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCA 204131 || ||| | || || | || | ||| ||||| || || || || | | Sbjct 758678 CTG----GGCCGAGATGTTGGGGATGTTTTGGATGGAGCCATTCTCAGCGATGATGCGGT 758623 Query 204132 TCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGA 204191 || || | | || ||||| ||| | ||| ||| | ||| |||||||| Sbjct 758622 TCTTCATGGCGTCGGACCACAGACCCGCATCAACCAGGTCCTTGAGCAGCCAGGGGTTGA 758563 Query 204192 TGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGA 204251 || ||| || || |||| ||| || | ||| | | | |||| ||| | || |||| Sbjct 758562 CGACCTGGAATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGA 758503 Query 204252 ACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCA 204311 | ||||||||||||| ||||| | ||||||||| || |||||||| || | |||| Sbjct 758502 AGCATTCGTTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACCAGCA 758443 Query 204312 GGGAGTTGCGCACACCGTATTTTTGGACCCTGC-GCTTCAGAGAGGTCCAGTCGTGCA-- 204368 | |||||| | |||| | | || |||| ||||| ||| ||| || || Sbjct 758442 AGCTGTTGCGGAGGCCGTGCTCCTTGA-TCTGCTCCTTCAAGGAGTCCCACTCCCACAGG 758384 Query 204369 TCGCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCC 204411 ||| || || || ||| ||||||||||| |||||| ||||| Sbjct 758383 TCGGAC--GGCTTGACGTCCCACATGTCGTACTGAAGAATGCC 758343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154911756240