Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 325 4e-84 seq3 129 6e-25 seq9 125 7e-24 seq7 105 7e-18 >seq1 Length=5717297 Score = 325 bits (360), Expect = 4e-84 Identities = 588/849 (69%), Gaps = 23/849 (3%) Strand=Plus/Plus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || ||||| || || || |||||||| || || || || || | | ||| ||| | Sbjct 4503627 TTCTGATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTC 4503686 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||||| | ||||||| ||| | |||||| || ||| | Sbjct 4503687 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGA---GGGCGATG 4503743 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT--GGTTTCGCAATTAAGTCCCA 132778 || || | |||||| |||||||||||||| ||| ||| || | | | || | |||| Sbjct 4503744 AGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGT--GGAGTTCATGCCCA 4503801 Query 132779 GCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTG 132837 |||| |||| |||||| || ||||| | ||| |||||||||||||| || |||||| Sbjct 4503802 GCAGG-GCACACGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTG 4503860 Query 132838 ACGATTTCCCTAACGCGCGCCGCGCTCGGCCG-TTGCACCAAATGCTTGAACATCAAGCA 132896 | ||| | | | | || ||| | || |||| | ||| | || | || Sbjct 4503861 ATGATGGCTCGGATCGACTCCTTGCTGGCACGGTTGCGG-AGGTGCGAGTGCAAGAGACA 4503919 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 |||||||| || | |||||||| | || ||||| |||||| ||| || | ||| Sbjct 4503920 GGCAAAGTCCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCC 4503979 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 ||||||||| ||||| || |||||||| || |||| || ||| || |||||||| Sbjct 4503980 GGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGAT 4504039 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 ||||||||||| || || || || || |||| | | || |||| | ||| | || Sbjct 4504040 ACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTGGAGTTCTTGTCCGAAAT 4504099 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| ||||| ||||| |||||||| | || ||| || ||||| |||| |||||| || Sbjct 4504100 CCATCGCAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAA 4504159 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACAT 133193 | || | || | | || | | ||||||||| |||||| || || | Sbjct 4504160 GA---GGTGCGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGT 4504216 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253 || ||||| | ||||||||| ||| || || ||||| |||||||| ||||| | Sbjct 4504217 CTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGAT 4504276 Query 133254 CTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 ||| || ||| ||| ||||| ||||| || |||||||| || || || |||||| Sbjct 4504277 CTGGACCTCTCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGC 4504336 Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCA 133370 || ||||| || | ||| |||||| | |||| ||||||| ||| | ||| Sbjct 4504337 AAAGAAGGCGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCA 4504396 Query 133371 GTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 |||| | ||||||||||||||||| | ||| ||| ||||||| || || |||||||| || Sbjct 4504397 GTCGTGAGTGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCAGAATGAGGCCTCGGCCTT 4504456 Query 133431 TTTGTACAT 133439 |||||||| Sbjct 4504457 CTTGTACAT 4504465 >seq3 Length=3706406 Score = 129 bits (142), Expect = 6e-25 Identities = 147/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 1555019 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1555078 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| |||| Sbjct 1555079 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 1555137 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| ||||| | ||| ||||| ||||| || || | ||||||||| |||||| Sbjct 1555138 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTA 1555197 Query 38420 CAACATCCAAAAGGA 38434 ||||||||| ||||| Sbjct 1555198 CAACATCCAGAAGGA 1555212 >seq9 Length=1038790 Score = 125 bits (138), Expect = 7e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || |||||||| ||||| |||||| |||| |||||| || |||||| | | Sbjct 526933 TCGTCAAGACTCTCACGGGTAAAACAATCACCCTCGAGGTCGAGTCCTCCGACACCATCG 526992 Query 38314 AAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | || || |||| ||||| ||||| || || ||||||| ||||| || | Sbjct 526993 ACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGA 527052 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | ||| || || ||||| || |||| || |||||| ||||||||||||||| |||| Sbjct 527053 TCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGG 527112 Query 38434 AAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | | || || ||| | || || ||| || | || || Sbjct 527113 AGTCCACCCTCCATCTCGTCCTCCGTCTGCGTGGTGG 527149 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| |||| || ||| | | Sbjct 527151 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACGCTCGAGGTTGAGTCATCG 527210 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || || | ||||| ||||| |||||| | || || Sbjct 527211 GACACGATCGACAACG-TCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCTGATCA 527269 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | |||| ||||||||| ||| |||| |||| || |||||| ||||||||| Sbjct 527270 GCAGCGATTGATTTTCGCGGGCAAGCAGTTGGAAGACGGTCGGACCCTCTCCGACTACAA 527329 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||| || |||||| |||| |||| |||| |||||| || | || || Sbjct 527330 CATTCAGAAGGAATCGACATTGCACCTGGTCCTGCGTCTGCGTGGTGG 527377 Score = 118 bits (130), Expect = 1e-21 Identities = 168/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| |||||||| ||| |||| ||||| | | | Sbjct 527379 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAAACCATTACCCTCGAGGTCGAATCAAGC 527438 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| ||||| || || | ||||| || || ||||| | || || Sbjct 527439 GACACCATCGACAACG-TTAAATCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCA 527497 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||||| || |||| |||||| | | ||||||||| Sbjct 527498 GCAGCGCCTTATCTTCGCTGGTAAGCAGCTCGAAGACGGTCGCACCTTGAGCGACTACAA 527557 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| |||||||| | || || ||| | | || |||| Sbjct 527558 CATCCAGAAGGAGAGC-ACGCTGCACCTTGTTCTCCGTCTTCGTGGAGGCC 527607 >seq7 Length=1181343 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || |||||||| || ||||| ||| |||| |||||| || | |||| | Sbjct 1039663 TTCGTGAAGACCCTCACGGGTAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACGATC 1039604 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||| ||||| || ||| ||||||| ||||| | Sbjct 1039603 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGATTG 1039544 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| ||||| || || | || |||||| ||||||||||||||| ||| Sbjct 1039543 ATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGGACCCTCTCCGACTACAACATCCAGAAG 1039484 Query 38433 G 38433 | Sbjct 1039483 G 1039483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172618687360