Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq8 214 2e-50 seq1 149 8e-31 seq3 91.5 2e-13 >seq8 Length=1130364 Score = 214 bits (236), Expect = 2e-50 Identities = 923/1438 (64%), Gaps = 41/1438 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||| | ||||| |||| ||| || || || || || || Sbjct 757149 CCTCAGCACATGATCATGAGAGTCGCCGTCGGCATCTGGGGAGACGACATCGAGCGAGTC 757208 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||||||| | |||||| | | |||| ||||| | || ||||||||| Sbjct 757209 CTCGAGACATACAATCTCATGTCCAGCAAGTTCTTCACGCACGCGTCTCCCACCCTCTTC 757268 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || |||| ||||| || ||| | | | | ||||| || Sbjct 757269 AACGCCGGAACCCCCCAGGCCCAGCTGTCCTCGTGCTTCTTGGTCGACATGAAGGACGAC 757328 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | ||||| |||| ||| |||| || ||| ||||| ||| ||||||| Sbjct 757329 AGCATCGAGGGCATCTACGACACCCTCAAGACGTGCGCCATGATCTCCAAGATGGCTGGT 757388 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909 || ||||| || || |||| || | |||| | ||| ||| | | || || | Sbjct 757389 GGCATCGGTCTGAACGTCCACCGCATCCGTGCCACT--GGCTCCTATATCGCCGGAACCA 757446 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 |||| || | || |||||||| ||||| ||||| | ||| ||| || | || | Sbjct 757447 ATGGAACCTCCAACGGCATTATTCCCATGCTCCGCGTCTACAACAACACCGCCAGATACG 757506 Query 111970 TAAACCAAGCTGGGCGTCG-CAAG------GGATCTATCGCAGTCTATCTTGAGCCATGG 112022 | |||| ||||| | |||| || | ||||| |||| |||||||| ||| Sbjct 757507 TCGACCA----GGGCGGCAACAAGCGCCCCGGCGCCTTCGCAATCTACCTTGAGCCCTGG 757562 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 ||||| || || | |||||||| || ||||| ||||| || | ||||||| || Sbjct 757563 CACGCCGACGTCTTCGAGTTCCTCGACTTGCGCAAGAACCATGGCAAGGAGGAGGTCCGT 757622 Query 112083 TGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAG 112142 ||| || || ||| || |||||||| || ||||||||||||||| | || ||| || Sbjct 757623 GCCCGGGACCTGTTCCTGGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAG 757682 Query 112143 AGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 | | | ||| | ||| | || || || || || ||||| ||| |||| | || Sbjct 757683 AACCTCGACTGGACGCTCATGTGCCCCAACGAATGC-CCCGGCCTCGCCGACTGCTACGG 757741 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGC---GACTGC--G 112256 | ||||| || ||||| ||| ||||||||| |||| |||| | | || | Sbjct 757742 CCAAGAGTTCGAGGCCCTGTACGAAAAGTACGA-----AAAGGAGGGCCGTGGCCGCAAG 757796 Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || | | || || || | ||||| | | || ||| || | || || ||||| || | Sbjct 757797 ACCATTCGTGC-GCAGAAGCTGTGGTACTCCATCCTCGAGGCCCAGACGGAGACCGGCAA 757855 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||||| ||||| |||||||| ||| ||||| || || ||||| | || Sbjct 757856 CCCCTTCATGCTGTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTAGGAAC 757915 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 |||| || ||||||||||| || || ||| | || | | | | || ||| ||| Sbjct 757916 GATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTCCGCCCCCGACGAGGTGGC 757975 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACAT 112494 || || ||||| || || | || || || | || || | || || | | Sbjct 757976 CGTCTGCAACCTGGCGTCCCTGGCCCTGCCGGCATTCGTCGACTACAATGAGGGCTGC-T 758034 Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 ||| | | || |||||||| || || || ||| ||||| |||||| | | Sbjct 758035 ATGACTTCCAGAAGCTCCACGAGGTCACCAAGGTCGTCGTTCGCAACCTCAACAGAATCA 758094 Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 | || || ||||| || || || | || || ||| | ||||| || | Sbjct 758095 TCGACGTGAACCACTACCCGGTCCAGGAGGCCTGGAACAGCAACATGCGCCACCGCCCCA 758154 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GA 112672 | || ||||||| || |||||||| || | ||| || | || || | || ||| || Sbjct 758155 TCGGCGTCGGTGTGCAGGGTCTCGCCGACGCCTTCCTTGCCCTG-CG-AATGCCTTTCGA 758212 Query 112673 TTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT 112732 ||| ||| || || | || | || || ||||| || || ||||| |||| Sbjct 758213 GTCCCCCGAGGCTCGCGAGCTGAACAAGAAGATCTTCGAGACCATCTACCACGCATCTCT 758272 Query 112733 TGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 ||||| |||| | || |||| || || || ||| | | || |||| ||||| Sbjct 758273 CGAGGCCTCCATGGAGATCGCCAAGGTCGAAGGCCCCTATTCATCGTTCAAGGGATCTCC 758332 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA---GACCAAGCTTCACTA 112849 || || | || | ||||| | || |||||||| | | | || | || | Sbjct 758333 TGCCTCGGAGGGCATTCTTCAGTACGACATGTGGGACGTCAAGCCGTCCGACCT---GTG 758389 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 || |||||| | | ||||| | ||||||||| | || || || ||||| | || | Sbjct 758390 GGAGTGGGACTCCTTGAAGGAGCAGATCAAGGAGCACGGCCTCCGCAACAGCTTGCTGGT 758449 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| || ||| |||| | || ||| | || || || |||||||| || || Sbjct 758450 CGCGCCCATGCCGACCGCCAGCACCTCGCAGATCCTCGGCAACAACGAATGCTTCGAGCC 758509 Query 112970 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 |||||| | |||||||| | | || || ||| || || || || | | |||||| Sbjct 758510 TTACACGTCCAACATCTACCAGCGACGAGTCCTGGCCGGTGAATTCCAGGTCGTCAAC 758567 >seq1 Length=5717297 Score = 149 bits (164), Expect = 8e-31 Identities = 355/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 ||||| || |||||| | || || || ||||| |||| ||||| | | | || Sbjct 4504438 TGGACCGCCGAAGAGATCGACCTGTCCAAGGACACTCACGACTGGAACAACCGCCTGAAC 4504379 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | ||||| | ||||| ||||||| || |||||||| | || ||||||||| Sbjct 4504378 GAGGACGAAAAATACTTCATCTCCCACATCCTCGCCTTCTTTGCCGCCTCTGATGGAATT 4504319 Query 101934 GTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 101991 || ||||| | | | | | | || || ||||| || |||| |||| || | | Sbjct 4504318 GTCAACGAGAACCTGGTTGAGCGATTCAGCGGA-GAGGTCCAGATCC-CTGAGGCCCGGT 4504261 Query 101992 CTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 102050 ||||| | || || | |||| ||| | | | || ||||| ||| ||| Sbjct 4504260 GCTTCTACG-GTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTC 4504202 Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || ||||| || || || ||| ||||| | ||| || | || Sbjct 4504201 ATTGACACCTACATCAAGGACACCGCCCAGCGGACGCACCTCTTCAACGCCGTCGACACG 4504142 Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 102169 |||| || || | ||||| || |||||||| || ||| ||| |||| | | Sbjct 4504141 ATTCCCTGCATCCGCAAGAAGGCCGATTGGGCCCTGCGATGGATTTCGGACAAGAACTCC 4504082 Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 ||||||| |||| ||| | || ||||| || |||||||||||||| ||| | Sbjct 4504081 A-CCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGC 4504023 Query 102230 CTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 || ||| | |||| |||||||||||||| ||||||||||| || ||| |||||||| Sbjct 4504022 TTT-TGCATCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCA 4503964 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||| ||||||||||||||||| |||||| || ||||| Sbjct 4503963 ACGAGCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGC 4503921 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/274 (69%), Gaps = 8/274 (3%) Strand=Plus/Plus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||| || ||||| || ||||||| |||||| ||| || | ||| | | | ||||| Sbjct 1431607 GGCGTCGATCTCGTCGATGAAGATGATGCACGGTGCGTTCTTGCGTCCCTCGGCGAAGAG 1431666 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 || || || || | ||| || || ||||||||||| ||||| | | | || || Sbjct 1431667 GTCGCGGACCCGTGACGGGCCGACGCCGACAAACATCTCGACAAACTCGGAGCCGCTCAC 1431726 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | |||||| || || || ||||| |||| |||||| || |||||||||| Sbjct 1431727 GCTGAA-GAAGGGCACGCCGGACTCGCCCGCCGTGGCCTTGGCGAGCAGCGTCTTACCCG 1431785 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299 | || || || ||||||| ||| || || || |||||||| || |||| | || | Sbjct 1431786 TCCCCGGGGGGCCGGCGAGGATGGCGCCCCGCGGGATCTTGGCCCCGAGCTTCTCGAACT 1431845 Query 16300 ATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 |||| |||||||| || || ||||| ||| Sbjct 1431846 ---TCTCGGGTTGCTTCAGGAAGCTCACAAACTC 1431876 >seq3 Length=3706406 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/300 (68%), Gaps = 16/300 (5%) Strand=Plus/Plus Query 176027 CCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAA 176086 ||||| ||| | || |||||| | ||||| ||| | |||| ||||||||||||||| Sbjct 2656323 CCACCGGCGAGCCTCGAACCAAAGTTACCACTTGGCACCAGAACATTGATATTGTTTGAT 2656382 Query 176087 CCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGG 176146 || | |||| | |||| || || || | | ||| |||||||| || |||||| Sbjct 2656383 CCGACAAAGTCCTGAGCCATACCGATGATTGTCTGCTGGAGGGAGACTTCGCCATGGTGG 2656442 Query 176147 TACGCACTCTTCTCTGCGACAAATG---CCG-CCAACTGCGCCACTTTCATCTCATCCTT 176202 || || ||| || || ||| | ||| ||||| ||| || || || ||||| Sbjct 2656443 TAAGCGGTCTGCT----GAGAAACGTAACCGTGCAACTCCGCGACCTTGAT---GTCCTT 2656495 Query 176203 GA----GATTCTTGTGGAAACATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 176258 || | ||| | | |||||| ||||||| || ||||| || |||||||| ||| | Sbjct 2656496 GACTCTGTTTCCT-TTGAAACAGGCGTACAGGACTTTGCGCTGACCAGGCTTGAAACCGT 2656554 Query 176259 CCGCCATGTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 176318 | |||| | ||| || ||| | ||| |||| ||||| || ||| ||||||| Sbjct 2656555 CGATCATGGACGGGATGGATCGCATGTTGTCGGCCATGCTGAACAGGATGAGCTCCTTGT 2656614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742174980880