Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-16 >seq1 Length=5717297 Score = 102 bits (112), Expect = 1e-16 Identities = 204/297 (69%), Gaps = 8/297 (3%) Strand=Plus/Plus Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 |||| ||||| ||||| |||||||| | ||| |||||| ||| ||| ||| || Sbjct 1431602 CCGATGGCGTCGATCTCGTCGATGAAGATGATGCACGGTGCGTTCTTGCGTCCCTCGGCG 1431661 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || || || || || || || || || || || |||||||| || || | | | | Sbjct 1431662 AAGAGGTCGCGGACCCGTGACGGGCCGACGCCGACAAACATCTCGACAAACTCGGAGCCG 1431721 Query 11797 GA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 || ||||| |||||| || ||||| || || |||| ||||| || ||||| Sbjct 1431722 CTCACGCTGAA-GAAGGGCACGCCGGACTCGCCCGCCGTGGCCTTGGCGAGCAGCGTCTT 1431780 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC--ACTTC-C 11912 |||||| || || | || ||||| | |||||| || ||||||||||| || |||| | Sbjct 1431781 ACCCGTCCCCGGGGGGCCGGCGAGGATGGCGCCCCGCGGGATCTTGGCCCCGAGCTTCTC 1431840 Query 11913 AAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || | ||| || | ||| |||||| ||||| |||| || ||| |||||| Sbjct 1431841 GAACT---TCTCGGGTTGCTTCAGGAAGCTCACAAACTCCATAATCTCCGTCTTGGC 1431894 Score = 98.7 bits (108), Expect = 1e-15 Identities = 387/599 (65%), Gaps = 25/599 (4%) Strand=Plus/Plus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCAT 119266 ||||||||| || | ||| || ||||| || ||||| || |||| |||||||| ||||| Sbjct 4503632 ATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCAT 4503691 Query 119267 AAAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGAC 119325 ||||| || || || ||| ||| |||| | | |||| | | | | || |||| Sbjct 4503692 GAAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGATG-AGGAGAC 4503750 Query 119326 GATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTAC 119385 | |||| ||| ||||||| || | |||| || ||||| || | || || Sbjct 4503751 GGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCAC 4503810 Query 119386 ACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445 |||| || || ||| | || | || |||||| | || || || | | ||||| Sbjct 4503811 ACGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTC 4503870 Query 119446 GAATAG-----TTTCTGTCGATGGTTT----GTTTCTCAAGAGTTTAAACAACTCTACGG 119496 | || | || ||| | | |||| | | | |||| || || || Sbjct 4503871 GGATCGACTCCTTGCTGGC-ACGGTTGCGGAGGTGC----GAGTGCAAGAGACA----GG 4503921 Query 119497 CAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAG 119556 |||| || || || || || || |||||||||||||| || |||| || || | Sbjct 4503922 CAAAGTCCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGG 4503981 Query 119557 GCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGC 119616 ||||||| || | ||||| ||||| || |||| |||| || ||||||||| | Sbjct 4503982 GCATGAGACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATAC 4504041 Query 119617 CCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGT-CGAA--C 119672 |||| || ||| || || | ||||||| || |||||| ||| ||||| |||| | Sbjct 4504042 CCTCGACGGCGGCAAAGGCAACGAGACGCTGGGC-AAAGGTGGAGTTCTTGTCCGAAATC 4504100 Query 119673 CACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAA 119732 || || ||||| | |||||| |||||||| | || | || ||| | ||| Sbjct 4504101 CATCGCAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAG 4504160 Query 119733 AGTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTC 119791 || ||| || | || ||||| || || | |||||||| ||||||||||| Sbjct 4504161 AGGTGCGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTC 4504219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975786496200