Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq8 183 4e-41 seq1 131 2e-25 >seq8 Length=1130364 Score = 183 bits (202), Expect = 4e-41 Identities = 571/865 (66%), Gaps = 33/865 (4%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||| | || |||| ||||| || ||| ||| || | | |||||| | Sbjct 758005 GGCAGGGCCAGGGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTACTCGATG 757946 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || || | |||||| || ||||| || | ||||| ||||| ||||| || Sbjct 757945 ATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCTCTTCCTG 757886 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| || |||||||| |||||| |||| | || ||||||||||| | || ||| || Sbjct 757885 TTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGATG 757826 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 106692 | | ||||| | || ||| | ||||| || |||| || |||||| ||||| Sbjct 757825 GAGTACCACAGCTTCTGCGCACG----AATGGTCTTGCGGCCACGGCCCTCCTTTTCGTA 757770 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GT 106751 |||| ||| ||||| || ||||| | || ||||| ||| || || || || || Sbjct 757769 CTTTTCGTACAGGGCCTCGAACTCTTGGCCGTAGCAGTCGGCGAGGCC-GGGGCATTCGT 757711 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 || || | || | ||| | || ||| || ||||||||||| || || || | Sbjct 757710 TGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGA 757651 Query 106812 TCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870 |||| |||| || || || | ||| || |||| || | || ||||| || Sbjct 757650 TCCAGAGGGCCAGGAACAGGTCCCGGGCACGGA-CCTCCTCCTTGCCATGGTTCTTGCGC 757592 Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC- 106929 || || |||||||| | || || |||||||| |||||||| |||| ||||| | || Sbjct 757591 AAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCCG 757532 Query 106930 -----CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAG 106983 ||| | | ||||| || | || || | || ||| ||| | ||||| || Sbjct 757531 GGGCGCTTGTTGCCGCCC----TGGTCGACGTATCTGGCGGTGTTGTTGTAGACGCGGAG 757476 Query 106984 CATTGGAATAATACCATCTGATTGACCATTTG-TCCCCCGA-ATACGAGATTTATTGGCT 107041 ||| |||||||| || | || ||||| | ||| ||| ||| ||| | |||| Sbjct 757475 CATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATAGGAG--CCAGTGGCA 757418 Query 107042 CTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCC 107101 | | |||| || || || || || |||||| ||| ||||| || ||| | Sbjct 757417 CGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCGCACGTC 757358 Query 107102 GTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTG 107161 | || || | ||||| || | ||| ||| ||||| || ||| | |||||| | Sbjct 757357 TTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCACGAG 757298 Query 107162 GACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACAT 107220 |||| ||| || || || || || || ||||||||||| || | ||||| ||| | Sbjct 757297 GACAGCTG-GGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGA--AG 757241 Query 107221 ACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATG 107278 | |||| |||||| | ||||||||| | ||| || ||||| || || |||| Sbjct 757240 AACTTGCTGGACATGAGATTGTATGTCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATG 757181 Query 107279 CCGATGGCCACACGCATAAACATGT 107303 |||| ||| || | ||| | ||||| Sbjct 757180 CCGACGGCGACTCTCATGATCATGT 757156 >seq1 Length=5717297 Score = 131 bits (144), Expect = 2e-25 Identities = 528/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Plus Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044 |||||| || || ||||||||||||||||||||||| || | ||| ||||| ||||| Sbjct 4503632 ATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCAT 4503691 Query 117045 AAAGTCAAATGGATTCTTCGCGTTCCAAATGGG-TGGCACCCCAACTTGTTTGAGGAGAC 117103 ||||| || || || | ||||| | || | | || | | | |||||||| Sbjct 4503692 GAAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGAT-GAGGAGAC 4503750 Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 | || | || |||| ||||||| |||| |||||||| || | || || Sbjct 4503751 GGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCAC 4503810 Query 117164 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 117223 | || || || || | ||| | | ||| || | || || || | | |||||| Sbjct 4503811 ACGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTC 4503870 Query 117224 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTG---AAGAGCTCCACGGCAAACT 117280 |||| | || | ||| | || || | | | ||||| || |||||| | Sbjct 4503871 GGATCGACTCCTTGCTGGCACGGTTGCGGAGGTGCGAGTGCAAGAGA--CA-GGCAAAGT 4503927 Query 117281 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGA 117340 || |||||||||||| || || || || || || || |||||| ||||| ||||||| Sbjct 4503928 CCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 4503987 Query 117341 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 117399 |||| |||||||| | ||| |||| | ||| || | ||| |||||||||||||| Sbjct 4503988 GACCGCGCTTCTTGAGCCAGAAAATGGATGCA-AAAGCACCGCTAAAGAAGATACCCTCG 4504046 Query 117400 ACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAA-CCATTT 117458 || ||||| |||| || |||| ||| |||| | ||| |||| ||| |||| Sbjct 4504047 ACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTG-GAGTTCTTGTCCGAAATCCATCG 4504105 Query 117459 CATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTG 117518 || ||||| | |||||||| || || || | || | || ||| | || | || Sbjct 4504106 CAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTG 4504165 Query 117519 CTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATG 117578 | || | | ||||| ||||| ||||||| | || || || ||| || Sbjct 4504166 CGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTG 4504225 Query 117579 AACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTT 117637 | | | ||| ||| | || | ||||||| | || || || ||||| || | Sbjct 4504226 GATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCT 4504284 Query 117638 CATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAAT 117696 | ||||| ||| | | | | ||||| ||||||||||| || | |||||||| Sbjct 4504285 C-TCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAG 4504343 Query 117697 GCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCA 117753 || ||||||| ||||| | ||||| | || |||| || | |||||||||| | Sbjct 4504344 GCGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGTGA 4504403 Query 117754 AGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 || ||||||| || | ||||| || ||||| Sbjct 4504404 GTGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCA 4504438 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/274 (69%), Gaps = 8/274 (3%) Strand=Plus/Plus Query 9371 GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAG 9430 ||| || ||||| || ||||||| || || ||| || | ||| | | ||||| Sbjct 1431607 GGCGTCGATCTCGTCGATGAAGATGATGCACGGTGCGTTCTTGCGTCCCTCGGCGAAGAG 1431666 Query 9431 ATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9489 ||||| |||| | | ||| || || ||||||||||| ||||| | | | || || Sbjct 1431667 GTCGCGGACCCGTGACGGGCCGACGCCGACAAACATCTCGACAAACTCGGAGCCGCTCAC 1431726 Query 9490 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9549 || | |||||| || || || ||||| |||| |||||| || |||||||||| Sbjct 1431727 GCTGAA-GAAGGGCACGCCGGACTCGCCCGCCGTGGCCTTGGCGAGCAGCGTCTTACCCG 1431785 Query 9550 TACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9606 | || || || ||||||| ||| ||||| || |||||||| || |||| | || | Sbjct 1431786 TCCCCGGGGGGCCGGCGAGGATGGCGCCCCGCGGGATCTTGGCCCCGAGCTTCTCGAACT 1431845 Query 9607 ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 |||| |||||||| || || ||||| ||| Sbjct 1431846 ---TCTCGGGTTGCTTCAGGAAGCTCACAAACTC 1431876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980586131960