Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq8 468 1e-126 seq1 259 9e-64 >seq8 Length=1130364 Score = 468 bits (518), Expect = 1e-126 Identities = 1307/1980 (66%), Gaps = 94/1980 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | |||||||||| |||||||| ||||||||||| ||||| Sbjct 758908 ACTGTGAACTGGATGGGGGCCGCAGCAGCCTGCGTGCGTAGGTAGTACATGCCCGTCTTG 758849 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCT-GTGAGTTTCTTCAGCTTAATATT 212668 ||||| ||| ||||||| | |||||| ||| |||| |||| | || | Sbjct 758848 AGGCCGAGCTT---CCAGCCGGTGAAGTGCAT-GCTCGTGA---TCTTGCCC---ATGGT 758799 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 | |||| | | |||| | ||| ||||||||| |||||| ||||| | | | Sbjct 758798 CGGGTCCTTCATGTGG---------ATGTTGAGGGACTGAGACTGGTCGATGAAGGCGCC 758748 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | ||| |||||||| | | ||| | | |||||||| ||||||||| |||||| | | Sbjct 758747 GCGGTCCGCGGCCATCTGGACGATCTGGCGCTGGGAGATCTCCCACACCGTCTTGTACAG 758688 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAG 212848 | |||| | | | || | ||||||||| || | || || || |||| Sbjct 758687 CGCCTTGATCTGGGCCGAGATGTTGGGGATGTTTTGGATGGAGCC-------ATTCTCAG 758635 Query 212849 C--TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACC 212900 | || | ||| |||| | ||| ||| || ||| ||||| ||||| | Sbjct 758634 CGATG-ATGCGGTTCTTCATGGCGTCGGACCACAGACCCGCATCAACCAGGTCCTTGAGC 758576 Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || |||||||| | |||||| ||||| | || || | | |||||| | ||| || Sbjct 758575 AGCCAGGGGTTGACGACCTGGAATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGAC 758516 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||| ||||||| || |||||||| || || ||||| | |||||||| || |||||| Sbjct 758515 GTGTAAGGCTCGAAGCATTCGTTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATG 758456 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCG--AAGCTCTG 213078 || || ||||| | ||||| | | |||||||| ||| | | || ||| Sbjct 758455 GGCGCGACCAGCAAGCTGTTGCGGAGGCCGTGCTCCTTGATCTG-CTCCTTCAAGG---- 758401 Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138 ||||||| || ||| |||||| ||| |||| ||||||||| |||| | | Sbjct 758400 ---AGTCCCA-CTCCCA--CAGGTCGGACGGCTTGACGTCCCACATGTCGTACTGAAGAA 758347 Query 213139 TGCCTTTGCTCACGGGGCTG-----CCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGC 213193 |||| ||| || ||| | |||| | | || || |||||||| | ||||||| Sbjct 758346 TGCC----CTC-CGAGGCAGGAGATCCCTTGAACGATGAATAGGGGCCTTCGACCTTGGC 758292 Query 213194 CAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAG 213253 | ||| ||| |||| || | |||| ||||||||| || || |||| | |||| || Sbjct 758291 GATCTCCATGGAGGCCTCGAGAGATGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAG 758232 Query 213254 CTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCC 213313 || ||||| |||||| ||| ||||| || | |||| | || || || || Sbjct 758231 CTCGCGAGCCTCGGGGGACTCGAAAGGCATTCGCAGGGCAAGGAAGGCGTCGGCGAGACC 758172 Query 213314 CTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGG 213373 ||| || |||| ||||||||| | ||| | || ||| || || ||||| | || Sbjct 758171 CTGCACACCGACGCCGATGGGGCGGTGGCGCATGTTGCTGTTCCAGGCCTCCTGGACCGG 758112 Query 213374 GTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGC 213433 ||| ||| ||||||||| ||||||||||||| | | || |||||||| | | Sbjct 758111 GTAGTGGTTCACGTCGATGATTCTGTTGAGGTTGCGAACGACGACCTTGGTGACCTCGTG 758052 Query 213434 CAGGTACTCGTGATTGAACACGTAGCCCCC---GTCCTGCACAAACTCAGGCAGGGCGAT 213490 || | || | | | | ||||| | || | || || | |||||||| | Sbjct 758051 GAGCTTCTGGAAGTCATA---GCAGCCCTCATTGTAGTCGACGAATGCCGGCAGGGCCAG 757995 Query 213491 GCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCA 213550 | ||||||||||| ||||||||||| | | | | | |||||| |||||||||||||| Sbjct 757994 GGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTACTCGATGATCTCGGTGCA 757935 Query 213551 CAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATC 213610 |||||| || ||||| || || ||||||| ||||| ||| |||| | || Sbjct 757934 GAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTC 757875 Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAG 213670 |||||| |||||| ||||| |||||||| ||||| | | || || | ||| || Sbjct 757874 CTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGATGGAGTACCACAG 757815 Query 213671 GTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCT---CGTACTGTTCGTA 213727 | | || || | | || | || ||| | | ||| |||||| |||||| Sbjct 757814 CTTCTGCGC----ACGAATGGTCTTGCGGCCACGGCCCT--CCTTTTCGTACTTTTCGTA 757761 Query 213728 GAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACAT 213787 || | | ||| || ||||| || | | || || || || ||| ||||| Sbjct 757760 CAGGGCCTCGAACTCTTGGCCGTAGCAGTCGGCGAGGCCGGGGCATTCGTTGGGGCACAT 757701 Query 213788 GAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846 ||| ||||||| || | |||| ||| | || |||||| || || |||| ||| || | Sbjct 757700 GAGCGTCCAGTCGAGGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGGATCCAGAGGG 757642 Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906 | ||||||||||| || | ||| ||| ||| ||| ||||||| || || | Sbjct 757641 CCAGGAACAGGTCCCGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGCAAGTCGAGGA 757582 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963 | || |||| ||| |||||||| ||||| | |||||| || |||||||| | || | | Sbjct 757581 ACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCCGGGGCGCTTGT 757522 Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023 ||||||||||||| || ||||| ||||| ||| ||| || | ||| | | | Sbjct 757521 TGCCGCCCTGGTCGACGTATCTGGCGGTGTTGTTGTAGACGCGGAGCATGGGAATAATGC 757462 Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGG 214083 ||||||| ||| |||||||| || ||||| ||||| | ||| | || ||| ||| Sbjct 757461 CGTTGGAGGTTCCATTGGTTCCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GGTGG 757406 Query 214084 A----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCC 214139 | || || |||||||| || |||||||||||||||||| | | | || || Sbjct 757405 ACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCGCACGTCTTGAGGGTGTCG 757346 Query 214140 ATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGC 214199 |||||| | |||||||| || | | || | ||||||||| || ||||||| | Sbjct 757345 TAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCACGAGGACAGCTGGGCC 757286 Query 214200 CTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGG 214259 || | || | |||||| || ||||| || || | | |||||| | || | | Sbjct 757285 TGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGAAGAACTTGCTGGACATG 757226 Query 214260 AGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTC 214319 || |||| ||||| |||||| |||||||| ||| | ||| ||| Sbjct 757225 AGATTGTATGTCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATGCCGACGGCGACTCTC 757166 Query 214320 ATCAGCATGTGCTGGGGCCTCTCTATGGGTCCT-TTGGGGCCCTTGAGCAGGTAGGAGCG 214378 || | ||||||||| || | ||| | | || | | | ||| | || || || || Sbjct 757165 ATGATCATGTGCTGAGGACGCTCGA-CGATCTTACCGTCGAGCTTCAAGAGATACGATCG 757107 Query 214379 CTCCAGAGTCTTGAACCCAAAGTAGGAGTAGGTATGATCGTTCCCGTGTATGAGGGCAGC 214438 ||| ||||||||||| || ||||| |||| | || || ||| | || ||| | Sbjct 757106 CTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCCCTCTCGTAGACGATGGCGGA 757047 Query 214439 GTCCAGCTCTTCCGCGTG-CTCTTGGCTCAGCTTGAAAATCTCGTCCGAGATCAAGGGAG 214497 ||| ||||| ||| ||| ||| || | || || | | |||| | ||||||| ||||| Sbjct 757046 GTCGAGCTCGTCCTTGTGTCTCATGACGCA-CTCGTACGTCTCCTTGGAGATCATGGGAG 756988 >seq1 Length=5717297 Score = 259 bits (286), Expect = 9e-64 Identities = 510/742 (69%), Gaps = 37/742 (5%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| ||||| || || | |||||||||||||| ||||| || | | ||||||||||| Sbjct 4503629 CTGATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTC 4503688 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTC 47952 ||||||| ||||||||||| | ||| || | | ||| | ||| | || Sbjct 4503689 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGATG----- 4503743 Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 || || | || |||||| |||||||||| | ||| |||||| ||||||||| | Sbjct 4503744 -AGGAGACGGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAG 4503802 Query 48013 GAGGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCA 48071 |||| |||||| || |||| || | |||||||| ||| || ||||| || | Sbjct 4503803 CAGGGCACACGG-CAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGA 4503861 Query 48072 CAATCTGCTTAACGCGG---GACTC--TGAGGGTTTG-TTGCGCAGGTGCTTG-GCATAG 48124 || ||| ||| ||||| || || | ||||| |||||| | ||| || Sbjct 4503862 TGATG-GCT-----CGGATCGACTCCTTGCTGGCACGGTTGCGGAGGTGCGAGTGCA-AG 4503914 Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 || |||||||||||| |||| | || ||||| || ||||||| ||||||||||| Sbjct 4503915 AGA---CAGGCAAAGTCCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAG 4503971 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 ||| || ||||||| || | || |||||||||||||| | || |||| || Sbjct 4503972 GTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTA 4504031 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 |||||||| ||||| || || || || || ||| | || | || | | ||||||| Sbjct 4504032 AAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTGGAGTTCTTG 4504091 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 || || ||||| || ||||| || |||||||| |||||| || ||||| || | | Sbjct 4504092 TCCGAAATCCATCGCAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACG 4504151 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTT 48421 || |||||| | | | | || | | |||| | ||||| | |||| || Sbjct 4504152 GCGTTGAAGAGGTGCGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAG---G 4504208 Query 48422 GCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCC 48481 | ||| |||| ||||| | ||||| || ||||||||| ||||||||| || |||| Sbjct 4504209 GAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCC 4504268 Query 48482 TCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCT 48541 ||| | ||| || ||| | ||||| ||| | ||| ||||| ||||| || ||||| Sbjct 4504269 TCAGGGATCTGGACCTCTCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCA 4504328 Query 48542 GAAGCAGCAAAGAAGGCAAGGA 48563 || || ||||||||||| |||| Sbjct 4504329 GAGGCGGCAAAGAAGGCGAGGA 4504350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532462319360