Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 309 6e-79 seq1 251 1e-61 >seq8 Length=1130364 Score = 309 bits (342), Expect = 6e-79 Identities = 842/1266 (67%), Gaps = 41/1266 (3%) Strand=Plus/Minus Query 221426 GCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGAA 221484 ||||||||||||||||| |||||| ||||||| || ||| | |||||||| || ||| Sbjct 758266 GCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCAG-CTCGCGAGCCTCGGGGGACTCGAA 758208 Query 221485 GGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCT 221544 ||||| ||||| | ||| ||||||| || ||||| || |||| |||||||| | Sbjct 758207 AGGCATTCGCAGGGCAAGGAAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGGGGCG 758148 Query 221545 GTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGA 221602 ||| | | ||||| | | | | || |||| |||| || ||| |||||||| | Sbjct 758147 GTGGCGCATGTTGCTGTTCCAGGC-CTCCTGGACCGGG-TAGTGGTTCACGTCGATGATT 758090 Query 221603 TTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACC 221662 |||||||||| || || ||| || |||||| ||||||||| | | Sbjct 758089 CTGTTGAGGTTGCGAACGACGACCTTGGTGACCTCGTGGAGCTTCTGGAAGT-------C 758037 Query 221663 AACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTA 221722 | | || ||| || | | | || || || || ||||| | | |||||||| Sbjct 758036 A--TAGCAGCCCTCATTGTAG---TCGACGAATGCCGGCAGGGCCAGGGACGCCAGGTTG 757982 Query 221723 CACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCAC 221782 || |||||||||||||| | || |||| |||||||| || ||||||||| || Sbjct 757981 CAGACGGCCACCTCGTCGGGGGCGGAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTG 757922 Query 221783 TTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATA 221842 ||| || || |||| || || || ||| | ||| ||||||||||| ||||| Sbjct 757921 CGGATCGTTCCTAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATG 757862 Query 221843 AAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCT 221901 ||||| ||| |||||| ||| ||| | || || || ||| || | |||| || | Sbjct 757861 AAGGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGATGGAGTACCACAGCT-TCTGCGCACG 757803 Query 221902 CACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCG--GTATAGAGCATGTCAAAC 221959 | ||| | | | ||||| |||||| ||| ||| || || | | ||| Sbjct 757802 AATGGTCTTGCGGCCACGGCCCTC---CTTTTCGTACTTTTCGTACAGGGCCT--CGAAC 757748 Query 221960 TTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGC 222019 | || ||||| ||| | ||||| || || | ||| ||||| || |||||| Sbjct 757747 TCTTGGCCGTAGCAGTCGGCGAGGCCGGGGCATTCGTTGGGGCACATGAGCGTCCAGTCG 757688 Query 222020 TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCT 222079 ||| | | ||| | || ||||||||| || |||||||| || ||| | || || || Sbjct 757687 AGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTCC 757628 Query 222080 CTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCA 222139 | || || ||||||| ||| | ||| || | || || | ||||| || | ||| Sbjct 757627 CGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGCAAGTCGAGGAACTCGAAGACGTCG 757568 Query 222140 GCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCC 222199 |||||||| ||||| || |||| || | |||||||| ||||||||||| ||||| || Sbjct 757567 GCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCG 757508 Query 222200 ACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCG 222259 || || | |||| ||| ||| || | || | | |||||||| || Sbjct 757507 ACGTATCTGGCGGTGTTGTTGTAGACGCGGAGCATGGGAATAATGCCGTTGGAGGTTCCA 757448 Query 222260 TTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGGCAGA-CATGCCGATA 222316 ||||| || || || | || ||| | || | | ||| | || ||||| Sbjct 757447 TTGGTTCCGGCGATATAGGAGCCAGTGGCAC---GGATGCGGTGGACGTTCAGACCGATG 757391 Query 222317 CCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATA 222376 ||||| || || |||||||||||||| ||||||| ||||| ||||||||| || Sbjct 757390 CCACCAGCCATCTTGGAGATCATGGCGCACGTCTTGAGGGTGTCGTAGATGCCCTCGATG 757331 Query 222377 GAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCG 222436 ||| ||||| | || | || || || || |||| ||| | | || || | |||| Sbjct 757330 CTGTCGTCCTTCATGTCGACCAAGAAGCACGAGGACAGCTGGGCCTGGGGGGTTCCGGCG 757271 Query 222437 TTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCT 222496 || || || |||||| ||||| || ||| | || ||||| |||| ||| ||||| Sbjct 757270 TTGAAGAGGGTGGGAGACGCGTGCGTGAAGAACTTGCTGGACATGAGATTGTATGTCTCG 757211 Query 222497 ACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTG 222555 | ||||| |||||| ||| ||| || | | | |||| ||||||| ||||| ||| Sbjct 757210 AGGACTCGCTCGATGTCGTCTCCCCAGATGCCG-ACGGCGACTCTCATGATCATGTGCTG 757152 Query 222556 GGGCCTCTCCACAGGAC---CCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTT 222612 || | ||| || | | || | ||||| | || || |||||| || |||||||| Sbjct 757151 AGGACGCTCGAC-GATCTTACCGTCGAGCTTCA-AG-AGATACGATCGCTCAAGAGTCTT 757095 Query 222613 GAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTCCGA 222672 ||| || ||||| | | || ||||| || ||| || | ||||| ||| ||||| Sbjct 757094 GAAGCCGAAGTACTGGTAGTTGAAGTCCCTCTCGTAGACGATGGCGGAGTCGAGCTCGTC 757035 Query 222673 CTTGTG 222678 |||||| Sbjct 757034 CTTGTG 757029 Score = 105 bits (116), Expect = 1e-17 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 221070 CGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCACTTGGA 221129 |||| | ||| |||||| || |||| |||||| || ||| || || |||| Sbjct 758613 CGTCGGACCACAGACCCGCATCAACCAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGA 758554 Query 221130 AATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGT 221189 | || || | || || | | |||||| | ||| || ||| | || |||| || |||| Sbjct 758553 ATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCATTCGT 758494 Query 221190 TGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGC 221249 ||||||| |||||||| | ||||||||||| |||||||| || ||||||| ||||||| Sbjct 758493 TGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACCAGCAAGCTGTTGC 758434 Query 221250 GCAGTCCG 221257 | || ||| Sbjct 758433 GGAGGCCG 758426 >seq1 Length=5717297 Score = 251 bits (278), Expect = 1e-61 Identities = 572/858 (67%), Gaps = 26/858 (3%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | |||| |||||||||||||||||| || ||| Sbjct 4504474 ATTTGGCAAATGTACAAGAAGGCCGAGGCCTCATTCTGGACCGCCGAAGAGATCGACCTG 4504415 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||||| ||| |||| || || || | | ||||| | | || || Sbjct 4504414 TCCAAGGACACTCACGACTGGAACAACCGC-CTGAACGAGGACGAAAAATACTTCATCTC 4504356 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 || | | || |||||||| ||||||||||| || || |||||||| ||| ||| | Sbjct 4504355 CCACATCCTCGCCTTCTTTGCCGCCTCTGATGGAATTGTCAACGAGAACCTGGTTGAGCG 4504296 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 ||||| | | || || ||| | |||||| ||| ||||||||||||||||| || Sbjct 4504295 ATTCAGCGGAGAGGTCCAGATCCCTGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGAT 4504236 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769 || || | ||||| ||| || || || || || || ||||| | ||| Sbjct 4504235 GGAGAACATCCACTCCGAGACCTACTCC---CTCCTCATTGACACCTACATCAAGGACAC 4504179 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGG 25828 |||| || | | || || ||| |||| ||| || ||| ||||| | ||||| Sbjct 4504178 CGCCCAGCGGACGCACCTCTTCAACGCCGTCGA-CACGATTCCCTGCATCCGCAAGAAGG 4504120 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888 | |||||| || ||||| | ||| | | || |||| | |||| || || | Sbjct 4504119 CCGATTGGGCCCTGCGATGGATTTCGGACAAGAACTCCACCTTTGCCCAGCGTCTCGTTG 4504060 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 ||||||| || || ||||| ||||| || |||||| | ||||| |||| |||||||||| Sbjct 4504059 CCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGCTTTTGCATCCATTTTCTGGCTCA 4504000 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || ||||||||| || ||| ||||||||||||||| | ||||||| Sbjct 4503999 AGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGG 4503940 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC-- 26066 ||||||||| || |||||||| || | || || ||| |||| ||| | | | Sbjct 4503939 GTCTCCACACGGACTTTGCCTGTCTCTTGCACTCG---CAC---CTCCGCAACCGTGCCA 4503886 Query 26067 TCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125 ||| ||| | || ||||||| || || || | |||||| |||||||| Sbjct 4503885 GCAAGGAGTCGATCCGAGCCATCATCACCGATGCCGTCGCCATCGAGCAGGAGTTTTTGA 4503826 Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185 ||||||||||| || || |||| || ||||| | Sbjct 4503825 CCGAGGCCCTGCCGTGTGCCCTGCTGGGCATGAACTCCACCCTGATGAAGCAGTACATCG 4503766 Query 26186 AGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGC--C 26243 ||| || ||||||| ||| || | || || || | |||||| |||| | Sbjct 4503765 AGTTCGTCGCCGACCGTCTCCTCATCGCCCTCGGCAACGAGAAGATCTACA--ACGCCAC 4503708 Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303 ||||| |||||||| ||||| ||||| || | | || ||||||||||||||||| || Sbjct 4503707 CAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGCGGCAAGACCAACTTCTTTGAGAA 4503648 Query 26304 GAGGGTCGGCGACTATCA 26321 | | ||||| |||||||| Sbjct 4503647 GCGTGTCGGTGACTATCA 4503630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844463293760