Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2 369 5e-97 seq9 178 2e-39 seq7 141 1e-28 seq4 104 3e-17 >seq2 Length=3830584 Score = 369 bits (408), Expect = 5e-97 Identities = 1034/1580 (65%), Gaps = 14/1580 (1%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAG 195364 |||||||| || || || || ||||| || || ||| | | | || || || Sbjct 2024729 GGTATCGACTTGGGTACCACGTACTCTTGCGTCGGTATCTTCAGTGAGGACCGATGCGAC 2024788 Query 195365 ATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAAT 195424 || ||| | || ||||| || ||||| || ||||| |||| ||||||||| || || | Sbjct 2024789 ATCATCGCCAACGACCAGGGTAACCGAACCACTCCCTCGTTCGTTGCCTTCACCGACACC 2024848 Query 195425 GAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTC 195484 || |||||| |||| |||||||| || || ||| || |||||||| || || ||| Sbjct 2024849 GAGCGTCTCATTGGTGATGCCGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGTC 2024908 Query 195485 TTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATA 195544 || ||||| |||||| | |||||||||||||| |||| | ||||| | ||| || Sbjct 2024909 TTCGACGCCAAGCGTTTGATTGGTCGCAAGTTCCAGGATGCCGAGGTCCAGGCCGACATG 2024968 Query 195545 AAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAA 195604 ||| ||| | | | ||| || | ||| ||||| | || | || || Sbjct 2024969 AAGCACTTCCCCT-TCAAG--GTCGTGGACAAGGCCTCCAAGCCCGTCATCGAGGTCGAG 2025025 Query 195605 TTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAG 195664 || | || |||| || || | ||||| ||||| || || ||||| | || ||| Sbjct 2025026 TTCAAGGGCGAGACCAAGACCTTCACCCCCGAGGAAATCTCCTCCATGGTCCTCATCAAG 2025085 Query 195665 ATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTA 195724 ||| |||||||| || | | | | |||| || || || | || || | ||||| Sbjct 2025086 ATGCGCGAGACTGCCGAGGCCTACCTTGGTAGCACCGTCAACAACGCTGTCATCACTGTC 2025145 Query 195725 CCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGT 195784 ||||| ||||||| || || || ||||| || |||||||| | | || || ||| Sbjct 2025146 CCTGCCTACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTCATCGCCGGT 2025205 Query 195785 CTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGAC 195844 || ||| || | || ||||| || || || || || || ||||| || ||||| ||| Sbjct 2025206 CTCAACGTCCTCCGCATCATCAACGAGCCCACCGCCGCCGCCATTGCCTACGGTCTCGAC 2025265 Query 195845 AAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGAT 195904 ||||| || | || || || | ||||| || ||||| |||||||| || ||| Sbjct 2025266 AAGAAGGTCGAGGGCGAGCGCAACGTCCTCATCTTCGACCTCGGCGGTGGTACCTTCGAT 2025325 Query 195905 GTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACT 195964 ||||| || || | ||||| | ||||| ||||| || ||| |||| || ||||| || Sbjct 2025326 GTCTCCCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCTACCGCCGGTGACACC 2025385 Query 195965 CATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCG 196023 || | |||||||| || ||||| || || || || || ||| | |||||| Sbjct 2025386 CACTTGGGTGGTGAGGACTTCGACAACCGCCTGGTCAACCACTTCGTC-AACGAGTTCAA 2025444 Query 196024 TCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGC 196083 || ||| | ||||| || | || || | | || || ||||| || | || || Sbjct 2025445 GCGCAAGCACAAGAAGGACCTCTCCTCCAACGCCCGTGCCCTGCGTCGTCTCCGAACCGC 2025504 Query 196084 ATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTC 196143 || || |||||||| ||||| ||||| || | || || || | ||||| || || Sbjct 2025505 TTGCGAGCGTGCCAAGCGAACCCTCTCCTCCTCTGCCCAGACCTCCATCGAGATCGACTC 2025564 Query 196144 GTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAA 196203 | | || || || |||||||| || | || |||||||| ||||| |||||| | Sbjct 2025565 CCTCTACGAGGGTATCGACTTCTACACCTCCATCACCCGTGCTCGTTTCGAAGAGCTCTG 2025624 Query 196204 CTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGAT 196263 | || | || | | | || || || | || ||| |||||| ||| Sbjct 2025625 CCAGGACCTCTTCCGCTCCACCCTCCAGCCCGTCGACCGTGTCCTTGCTGACGCCAAGTG 2025684 Query 196264 GGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGAT 196323 || ||| || | || ||||| || || || || || |||||||| || | Sbjct 2025685 CGACAAGAGCGCCGTCCACGAGATTGTTCTCGTCGGTGGCTCCACCCGTATCCCCCGCGT 2025744 Query 196324 TCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGA 196383 || || | | | || |||||| || || |||| | |||||||| || Sbjct 2025745 CCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAGGTCCATCAACCCCGA 2025804 Query 196384 TGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAA 196443 ||| || || || || ||||| ||||| ||||| || || || || || | || | Sbjct 2025805 TGAGGCCGTCGCCTACGGTGCTGCCGTCCAGGCCGCCATCCTGTCTGGCG-ACACCACCT 2025863 Query 196444 TAACGTCCA------AGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGA 196497 | ||||| ||||| ||||| || || ||||| ||| | || || ||| | || Sbjct 2025864 CCAAGTCCACCAACGAGATC--CTGCTTCTCGACGTTGCCCCCCTGTCTCTCGGTATCGA 2025921 Query 196498 AACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAA 196557 || || ||||| | ||||| || | || | ||||| || ||||| || ||||| Sbjct 2025922 GACTGCCGGTGGCATGATGACCAAGCTCATCCCCCGCAACACCACCATTCCCACCAAGAA 2025981 Query 196558 GGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGA 196617 | | ||||| || || | || || || || || ||||| | || || || || || Sbjct 2025982 GTCCGAGGTCTTCTCCACCTTCTCTGACAACCAGCCCGGTGTCCTCATCCAGGTCTACGA 2026041 Query 196618 AGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGAT 196677 || || || || | ||||| ||| | || || || | ||||| | || || || Sbjct 2026042 GGGTGAGCGTCAGCGCACCAAGGACAACAACCTGCTCGGCAAGTTCGAGCTCACTGGCAT 2026101 Query 196678 TCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGG 196737 ||| |||| || | ||||| || ||||| | || |||||| | || || || || Sbjct 2026102 TCCCCCTGCCCCTCGTGGTGTCCCCCAGATCGAGGTCACCTTCGACGTCGATGCCAACGG 2026161 Query 196738 AATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTAC 196797 || | |||||| | || | || |||| | || || || | || || || || || Sbjct 2026162 TATCATGAACGTCTCCGCCGTCGAGAAGGGCACCGGAAAGTCCAACAAAATCGTTATCAC 2026221 Query 196798 CAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAA 196857 ||| |||||||| || || || |||||||| ||||| |||||| | || || || || Sbjct 2026222 CAACGACAAGGGCCGCCTGTCCAAGGAGGAGATTGAGCGTATGCTCAGCGACGCCGAGAA 2026281 Query 196858 GTACAGGGAAGAAGACGAGG 196877 || || ||| || ||||||| Sbjct 2026282 GTTCAAGGAGGAGGACGAGG 2026301 >seq9 Length=1038790 Score = 178 bits (196), Expect = 2e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || || | || || || || ||||| ||||||||||||| Sbjct 527146 GTGGTATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACGCTCGAGGTTGAGT 527205 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| ||||| ||| |||| ||||||||||||| ||||| || ||||| || | Sbjct 527206 CATCGGACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCTG 527265 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| ||| | ||||| || || || ||| | ||||| || || |||||| | || | Sbjct 527266 ATCAGCAGCGATTGATTTTCGCGGGCAAGCAGTTGGAAGACGGTCGGACCCTCTCCGACT 527325 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| ||||| || || | ||||| || || | || || |||||| Sbjct 527326 ACAACATTCAGAAGGAATCGACATTGCACCTGGTCCTGCGTCTGCGTGGTGGT 527378 Score = 170 bits (188), Expect = 3e-37 Identities = 177/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||| | || || ||||| || ||||||||||| || | Sbjct 527374 GTGGTATGCAGATCTTCGTCAAGACCTTGACGGGTAAAACCATTACCCTCGAGGTCGAAT 527433 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| ||||| ||| | ||| | |||||||| || |||||||||||||| || | Sbjct 527434 CAAGCGACACCATCGACAACGTTAAATCGAAGATTCAGGACAAGGAAGGCATTCCTCCTG 527493 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| || ||||| || |||||||| ||||| ||||| || || ||| | || | Sbjct 527494 ATCAGCAGCGCCTTATCTTCGCTGGTAAGCAGCTCGAAGACGGTCGCACCTTGAGCGACT 527553 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| || || ||||||||||| | ||||| || || Sbjct 527554 ACAACATCCAGAAGGAGAGCACGCTGCACCTTGTTCTCCGTCTTCGTGGAGG 527605 Score = 168 bits (186), Expect = 9e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || || || ||||| || |||||||||||||| |||||||| Sbjct 526592 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCGTCC 526651 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || ||||||| || || ||||| ||||| || || || ||| Sbjct 526652 GACACCATTGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 526711 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || |||||||| || || || || ||||| || || | | ||||||||| Sbjct 526712 CAACGCCTCATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACTTTGTCGGATTACAAC 526771 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| || || | ||||| |||||| Sbjct 526772 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTTCGCGGTGGT 526819 Score = 150 bits (166), Expect = 2e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || || || || || ||||| |||||||||||||| ||||| || ||||| ||||| Sbjct 526935 GTCAAGACTCTCACGGGTAAAACAATCACCCTCGAGGTCGAGTCCTCCGACACCATCGAC 526994 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 || |||| | ||||| ||||| ||||| ||||| || ||||| ||||| || || || Sbjct 526995 AATGTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATC 527054 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 || || || || ||||| || || || || |||||| | || |||||| | || |||||| Sbjct 527055 TTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAG 527114 Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || || || || || | || || |||||| Sbjct 527115 TCCACCCTCCATCTCGTCCTCCGTCTGCGTGGTGGT 527150 >seq7 Length=1181343 Score = 141 bits (156), Expect = 1e-28 Identities = 140/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || || || ||||||||||| ||||| || ||||| ||| Sbjct 1039663 TTCGTGAAGACCCTCACGGGTAAGACCATTACCCTCGAGGTCGAGTCCTCGGACACGATC 1039604 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || |||| ||||||| || || ||||| ||||| || ||||| ||||| ||| | Sbjct 1039603 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCGATTG 1039544 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || || || || || ||||| |||||||| || |||||| | || |||||| | || ||| Sbjct 1039543 ATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGGACCCTCTCCGACTACAACATCCAGAAG 1039484 Query 172051 G 172051 | Sbjct 1039483 G 1039483 >seq4 Length=2575654 Score = 104 bits (114), Expect = 3e-17 Identities = 171/243 (70%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 ||||| ||||| || ||||| || | | || || || || ||| || || | || Sbjct 1995172 CAACGCCAGGCCACCAAGGATGCCGGCACCATCGCCGGCCTCAACGTCCTCCGAGTCGTC 1995113 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 ||||| || || ||||| || || || || || |||||||||| | | | ||| | | Sbjct 1995112 AATGAGCCCACCGCGGCCGCCATCGCCTACGGCCTGGACAAGACCGACGGCGA-GCGCCA 1995054 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || |||| ||| ||||||||||||||||| || |||||||| |||||| || || Sbjct 1995053 GATC-ATTG-TCTACGATCTCGGTGGTGGTACTTTCGATGTCTCTCTTCTCTCCATCGAC 1994996 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 || | ||||| || ||| || || ||||| || || || |||||||| || ||| Sbjct 1994995 AAGGGCGTTTTCGAGGTCCTGGCCACCGCCGGTGACACCCACCTCGGTGGTGAGGACTTC 1994936 Query 195986 GAT 195988 ||| Sbjct 1994935 GAT 1994933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862161524880