Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1 120 9e-22 >seq1 Length=5717297 Score = 120 bits (132), Expect = 9e-22 Identities = 192/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||| | | ||||| | ||| |||||||| ||||||||| | || || || || Sbjct 1225816 TCTTCGAGAGCCTTGACCAGACGGCGCTGAATGTAACCAGTTTCGGCGGTCTTGACGGCC 1225757 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-AG 302690 || || || ||||| | | ||| |||| || |||||||| | |||| ||| ||| || Sbjct 1225756 GTGTCGATGAGACCTTCTCTACCGGCCATGGCGTGGAAGAAAAACTCTGACGG-CGTCAG 1225698 Query 302691 CCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGT 302750 || | | ||||| |||| |||||||| || |||||||| || | || |||||| Sbjct 1225697 ACCTCTGAGGTAGGAGTTCTCGACGAAACCGCGAGCCTCGGGGGAGTAATCATCCTTGGT 1225638 Query 302751 AAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTG 302810 ||||| || || || | || || ||||| | || ||||||||||| || || |||| Sbjct 1225637 GAAGTGGGGAAGCGTTCGGTACTTGAAGCCGAAAGGAATACGCTTTCCTTCGACAATCTG 1225578 Query 302811 CTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| || | | | ||||||| ||||| || Sbjct 1225577 CTGACCGACCAAGGCCGTCATCTGAGAAATGTT 1225545 Score = 104 bits (114), Expect = 7e-17 Identities = 249/373 (67%), Gaps = 8/373 (2%) Strand=Plus/Minus Query 133289 GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAAT 133348 ||||| || || | | || ||||| ||| || || | ||||| |||||| || Sbjct 4504288 GGAGAGGTCCAGATCCCTGAGGCCCGGTGCTTCTACGGTTTCCAGATCATGATGGAGAAC 4504229 Query 133349 ATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAG--- 133405 ||||| || || || || || ||||| || |||||||| || |||| |||| Sbjct 4504228 ATCCACTCCGAGACCTACTCCCTCCTCATTGACACCTACATCAAGGACACCGCCCAGCGG 4504169 Query 133406 AAGCACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGG 133465 | |||| || ||||||||| | | |||| || || ||||| | || ||| Sbjct 4504168 ACGCAC---CTCTTCAACGCCGTCGACACGATTCCCTGCATCCGCAAGAAGGCCGATTGG 4504112 Query 133466 GCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCT 133525 || | |||||| ||||||| | | ||||| ||||||||||| ||||| Sbjct 4504111 GCCCTGCGATGGATTTCGGACAAGAACTCCACCTTTGCCCAGCGTCTCGTTGCCTTTGCC 4504052 Query 133526 GTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCG 133584 | || ||||| || || || || ||||| || ||| || ||||| ||||| || ||||| Sbjct 4504051 GCCGTCGAGGGTATCTTCTTTAGCGGTGC-TTTTGCATCCATTTTCTGGCTCAAGAAGCG 4503993 Query 133585 TGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCA 133644 ||| | | || || || || || ||||| || || || | ||||||| || || Sbjct 4503992 CGGTCTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTCCA 4503933 Query 133645 CACCGAATTTGCC 133657 ||| || |||||| Sbjct 4503932 CACGGACTTTGCC 4503920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817053127773