Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq8 185 8e-42 seq9 105 6e-18 >seq8 Length=1130364 Score = 185 bits (204), Expect = 8e-42 Identities = 1059/1673 (63%), Gaps = 54/1673 (3%) Strand=Plus/Minus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417 ||||||||||| |||||||| || | || || || || | | || ||||| Sbjct 758710 ATCTCCCACACCGTCTTGTACAGCGCCTTGATCTGGGCCGAGATGTTGGGGATGTTTTGG 758651 Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTG 138477 ||| || || | || |||||||| || ||||| | ||| ||||| | | Sbjct 758650 ATGGAGCCATTCTCAGCGATGATGCGGTTCTTCATGGCGTCGGACCACAGACCCGCATCA 758591 Query 138478 ATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGA 138537 | || ||| || | ||| | ||| | |||||| ||||||||||||| ||||| || Sbjct 758590 ACCAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAATTCACCGGCCAGGACTCGTCGC 758531 Query 138538 ACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTG 138597 ||| |||||| ||| ||||||| || |||||||||| || || ||||| | ||| Sbjct 758530 TGGTAGATGTTGGACGTGTAAGGCTCGAAGCATTCGTTGTTGCCGAGGATCTGCGAGGTG 758471 Query 138598 GTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGT 138657 | |||||||||||| ||| |||| | || || | ||||| |||||| | Sbjct 758470 CTGGCGGTCGGCATGGGCGCGACCAGCAAGCTGTTGCGGAGGCCGTGCTCCTTGATCTGC 758411 Query 138658 TCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGT 138717 ||||| | || ||| ||||||| ||| || || || |||||| |||||||| Sbjct 758410 TCCTTCAAGGAGTCCCACTCCCACAGGTCGGACGGCTTGACGTCCCACATGTCGTACTGA 758351 Query 138718 AACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACC--AAACTCTTGCG 138775 | || ||| || ||| || | | |||| || || || |||| | Sbjct 758350 AGAATGCCCTCCGAGGCAGGAGATCCCTTGAACGATGAATAGGGGCCTTCGAC-CTTG-G 758293 Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835 | | ||| || |||||||| | | | ||| || || ||| |||| || || | Sbjct 758292 CGATCTCCATGGAGGCCTCGAGAGATGCGTGGTAGATGGTCTCGAAGATCTTCTTGTTCA 758233 Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCC 138895 || || ||||||| | |||| | ||||| || || ||| |||||||| || | Sbjct 758232 GCTCGCGAGCCTCGGGGGACTCGAAAGGCATTCGCAGGGCAAGGAAGGCGTCGGCGAGAC 758173 Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGC-GGCTTC---G 138951 | ||||| || || |||| ||||| ||||||| || ||| || | ||| || | Sbjct 758172 CCTGCACACCGACGCCGATGGGGCGGTGGCGCA----TGTTGCTGTTCCAGGCCTCCTGG 758117 Query 138952 ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTA 139011 | || || | ||| || ||||||||| |||| | || || ||||| ||||| || | Sbjct 758116 ACCGGGTAGTGGTTCACGTCGATGATTCTGTTGAGGTTGCGAACGACGACCTTGGT-GAC 758058 Query 139012 TGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACG-ACGTCGACAAATT 139069 | | | | | | || || || |||| | |||| ||||||| | | || || Sbjct 758057 CTCGTGGAGCTTCTGGAAGTCATAGCAGCCCTCATTGTAGTCGACGAATGCCGGCA---- 758002 Query 139070 TGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGA 139129 | | | || || | |||||| || ||||| ||||||||| || ||| |||| Sbjct 758001 ---GGGC---CAGGGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTACTCGA 757948 Query 139130 CAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTC 139189 || |||| || | || | |||||| |||| || | || ||||| || | Sbjct 757947 TGATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCTCTTCC 757888 Query 139190 GGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAA 139249 ||| || || || ||||| ||||| | || |||| || ||| || | ||| | | Sbjct 757887 TGTTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTCGAGGA 757828 Query 139250 TGAATTTGAACAAGTCCCTAGCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCG 139305 || | | ||| | | || | || ||| || | | | | || ||| Sbjct 757827 TGGAGTACCACAGCTTCTGCGCACGAATGGTCTTG-CG---GCCACGGCCCTCCTTTTCG 757772 Query 139306 TACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTG 139365 ||||||||||| || | ||||| || |||||| ||| | || || | || | | Sbjct 757771 TACTTTTCGTACAGGGCCTCGAACTCTTGGCCGTAGCAGTCGGCGAGGCCGGGGCATTCG 757712 Query 139366 TCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGA 139425 | || |||||||||| ||| || |||| || ||| ||| ||||||| ||||| || Sbjct 757711 TTGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGG 757652 Query 139426 ATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGT-TT 139484 ||||| | || | | || || || || || ||| ||||| | | | Sbjct 757651 ATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACCTCCTCC-TTGCCATGGTTCTTGCG 757593 Query 139485 CATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC 139544 || || ||||| || || ||||| |||||||| || || || ||||| || | ||||| Sbjct 757592 CAAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGCGCC 757533 Query 139545 TTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACAT 139601 || ||||| || || ||||||| || | | || ||| | ||||| | ||| Sbjct 757532 GGGGCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCGGTGTTGTTGTAGACGCGGAGCAT 757473 Query 139602 CGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG----ATGGGA-CTGTTGCGAGCT 139656 || | ||| | | ||||| ||||| | ||| || ||| | || || Sbjct 757472 GGGAATAATGCCGTTGGAGGTTCCATTGGT--TCCGGCGATATAGGAGCCAGTG---GCA 757418 Query 139657 CGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-ATC 139715 |||| | || || || | ||||| || || | | ||||| || | |||| || Sbjct 757417 CGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCGCACGTC 757358 Query 139716 GCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGA 139775 | | || ||||| || || ||||||||||||| ||| ||||| ||||| || Sbjct 757357 TTG-AGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCACGA 757299 Query 139776 CGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACAT 139835 || || || | | || ||||| || || || ||| |||||||||||| | Sbjct 757298 GGACAGCTGGGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGAAGAA 757239 Query 139836 TTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACC 139895 | | ||||| | | ||| || |||| | | | | | || || ||| ||| || Sbjct 757238 CTTGCTGGACATGAGATTGTATGTCTCGAGGACTCGCTCGATGTCGTCTCCCCAGATGCC 757179 Query 139896 GACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttttttt 139955 ||| | ||||| ||| | ||| || || || ||| | | | || |||| || Sbjct 757178 GACGGCGACTCTCATGATCATGTGCTGAGGACGCTCGACGATCTTACCGTCGAGCTTCAA 757119 Query 139956 CAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||| | || ||| || |||||| |||| |||||| |||||||| || Sbjct 757118 GAGATACGATCG--CTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTC 757068 >seq9 Length=1038790 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || || || |||||||| || || ||||| || || || ||||||| | || | Sbjct 526938 AAGACTCTCACGGGTAAAACAATCACCCTCGAGGTCGAGTCCTCCGACACCATCGACAAT 526997 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||||||||| || || || |||||||| || || ||| ||||||| Sbjct 526998 GTCAAGTCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTGATCTTC 527057 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 ||||| || ||||| ||||| ||| | | || || || ||||| || ||||| || Sbjct 527058 GCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCC 527117 Query 24899 ACACTACA 24906 || || || Sbjct 527118 ACCCTCCA 527125 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || ||||| || || | || Sbjct 526592 ATGCAGATCTTCGTCAAGACTCTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCGTCC 526651 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || ||||| || || Sbjct 526652 GACACCATTGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 526711 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | |||||||| || || || || |||||| | | |||| ||||| ||| Sbjct 526712 CAACGCCTCATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACTTTGTCGGATTACAAC 526771 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || ||| | || | || | ||||| || Sbjct 526772 ATCCAGAAGGAGTCCACCCTCCACCTCGTCCTCCGCCTTCGCGGTGG 526818 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || |||||||| || || | | Sbjct 527151 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACCATCACGCTCGAGGTTGAGTCATCG 527210 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| |||||||| || || || || || ||||| Sbjct 527211 GACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAGGGTATTCCCCCTGATCAG 527270 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| || || || || ||| |||| || | | | | || || || ||| Sbjct 527271 CAGCGATTGATTTTCGCGGGCAAGCAGTTGGAAGACGGTCGGACCCTCTCCGACTACAAC 527330 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| |||||||||||| | ||| |||| |||| |||| || || Sbjct 527331 ATTCAGAAGGAATCGACATTGCACCTGGTCCTGCGTCTGCGTGGTGG 527377 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || |||||||| ||||| ||||| || ||| | | | Sbjct 527379 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAAACCATTACCCTCGAGGTCGAATCAAGC 527438 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| |||| | ||||| || ||||| ||||| || ||||| ||||| Sbjct 527439 GACACCATCGACAACGTTAAATC-GAAGATTCAGGACAAGGAAGGCATTCCTCCTGATCA 527497 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858 || || | ||||| || || || ||||| || || Sbjct 527498 GCAGCGCCTTATCTTCGCTGGTAAGCAGCTCGAAGA 527533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897436912120