Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=5717297 Score = 89.7 bits (98), Expect = 4e-13 Identities = 197/289 (68%), Gaps = 10/289 (3%) Strand=Plus/Minus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 || |||||| |||||| || || || || ||||| | | || | ||||| ||| Sbjct 4564381 ACGAACTTGTCGATGAAGCCGTCGAGGAGATCCTGGAGGGTCTTGGCCTGGTGGGCACCG 4564322 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| |||| || | | | || || || | ||||| || ||| | || Sbjct 4564321 TTGATGATCCATCGCTCACCCTGGGGGTAGAACTTGGTCGGGGCGCCGAGTTCGAAACCA 4564262 Query 34471 AAGTACTT--TGTCG-GGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATG 34527 |||||||| || || || | ||| | | || || | | |||||| ||||| | Sbjct 4564261 AAGTACTTGATGACGTGGGAGCTGGGCCG-CGCGAGAGAGGC--GGCGATGCTGGGCAGG 4564205 Query 34528 TTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCG 34585 ||||||||||| |||||||| || |||||||||||||||||||||| | || | | | Sbjct 4564204 TTGACGATGACGGTCTTGATACCATTGCCCTTTCCTTCGACCTTGGTCTGGAGCTCCTC- 4564146 Query 34586 GCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634 ||| ||||| || ||||| | |||| | || ||| |||||| || Sbjct 4564145 -CATCTTGTAACGATAGAAGGTGTCCTTGATATCACGGCGAACGTTGAC 4564098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841454086297