Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3 143 2e-29 seq9 114 8e-21 seq7 114 8e-21 >seq3 Length=3706406 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 || || | || ||||||||| ||||| | |||| ||||||||| ||||| ||||| || Sbjct 1555248 CCACCACGCAGCCTCAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1555189 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| |||| |||| || || ||||| ||||||||||| || || |||||||| | || Sbjct 1555188 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGGGGG 1555129 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930 | ||||||||||| | || || |||||| | || | || | ||| || Sbjct 1555128 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1555069 Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||| || ||||| |||||||||||||| || || |||||||| Sbjct 1555068 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1555022 >seq9 Length=1038790 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||| || ||||| | |||| |||| Sbjct 526803 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGACAAAGTGCGGCCATCC 526744 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || || ||||| || ||||||||||| | || | ||||||||||| Sbjct 526743 TCGAGTTGCTTGCCAGCAAAGATGAGGCGTTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 526684 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || || | || | || | ||| || || | ||| |||||| Sbjct 526683 TGGATCTTGGACTTCACATTGTCAATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTC 526624 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || ||||| || |||||||||||| Sbjct 526623 TTTCCGGTCAGAGTCTTGACGAAGATCTGCATG 526591 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 8/204 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 527134 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 527075 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || |||||||||||||||||||| || |||||||| | || | ||||||||||| Sbjct 527074 TCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCT 527015 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || ||||| || | ||||| || || |||||| || | ||| || Sbjct 527014 TGGATCTTCGACTTGAC--AT--TGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTGAT 526959 Query 34942 GGTCTTTCCCGTGAGGGTCTTTAC 34965 || || |||||||| ||||| || Sbjct 526958 TGTTTTACCCGTGAGAGTCTTGAC 526935 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34765 CAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCAT 34823 |||||||||||| |||| | | |||||||||||||| ||||| || ||| | || | | Sbjct 527363 CAGGACCAGGTGCAATGTCGAT-TCCTTCTGAATGTTGTAGTCGGAGAGGGTCCGACCGT 527305 Query 34824 CGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGT 34883 | |||| ||||| || ||||| |||| ||| ||||| || | || | |||||||||| Sbjct 527304 CTTCCAACTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGGGGAATACCCTCCTTGT 527245 Query 34884 CGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | | || || |||||| | |||| || | ||| || || | || |||| Sbjct 527244 CTTGAATCTTGGACTTGACGTTGTCGATCGTGTCCGATGACTCAACCTCGAGCGTGATGG 527185 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| ||||| | ||||| || ||||||||||| Sbjct 527184 TCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 527151 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 10/217 (5%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | |||||||||||||| ||||| ||||| | | |||| | || Sbjct 527590 AGAACAAGGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCT 527531 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || ||||| || | || | || |||||||| Sbjct 527530 TCGAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGATCAGGAGGAATGCCTTCCTTGTCC 527471 Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || || ||| ||| |||| | ||| || || ||||| || | ||| | Sbjct 527470 TGAATCTTCGATTTAACGTTGTCGATGGTGTCGCTTGAT-----TCGACCTCGAGGGTAA 527416 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || ||||| | |||||| || ||||||||||| Sbjct 527415 TGGTTTTACCCGTCAAGGTCTTGACGAAGATCTGCAT 527379 >seq7 Length=1181343 Score = 114 bits (126), Expect = 8e-21 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 ||||||| ||||| ||||| || ||| | || |||| || || ||||| |||||||||| Sbjct 1039483 CCTTCTGGATGTTGTAGTCGGAGAGGGTCCGGCCATCTTCGAGCTGCTTGCCGGCGAAGA 1039542 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 ||| ||| |||||||| | || | ||||||||||| | || || ||||| Sbjct 1039543 TCAATCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1039602 Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 | |||| || || |||||| || | ||| |||||||| |||||||||||||| || | Sbjct 1039603 CGATCGTGTCCGAGGACTCGACCTCGAGGGTAATGGTCTTACCCGTGAGGGTCTTCACGA 1039662 Query 34968 A 34968 | Sbjct 1039663 A 1039663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692684887951