Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq9 102 6e-17 >seq9 Length=1038790 Score = 102 bits (112), Expect = 6e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| |||| || | || ||||| || |||||||| || || | Sbjct 527377 CCACCACGCAGACGCAGGACCAGGTGCAATGTCGATTCCTTCTGAATGTTGTAGTCGGAG 527318 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || || | || ||||| || | ||||||| |||||||| || ||| Sbjct 527317 AGGGTCCGACCGTCTTCCAACTGCTTGCCCGCGAAAATCAATCGCTGCTGATCAGGGGGA 527258 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 |||||||| |||||||| ||| || | ||||| | || | ||||| || || || Sbjct 527257 ATACCCTCCTTGTCTTG-AATCTTGGACTTGACGTTGTCGATCGTGTCCGATGACTCAAC 527199 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || || || || || || |||||||| Sbjct 527198 CTCGAGCGTGATGGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 527151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219063849089