Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 6e-12 >seq1 Length=5717297 Score = 86.0 bits (94), Expect = 6e-12 Identities = 271/413 (66%), Gaps = 9/413 (2%) Strand=Plus/Minus Query 50197 TCAACGCTTTCGATAATATTCCGTGTGTGCGTAAAAAGGACGATTGGGCATTGAAATGGA 50256 ||||||| |||| | ||||| || | || || |||| ||||||||| || ||||| Sbjct 4504158 TCAACGCCGTCGACACGATTCCCTGCATCCGCAAGAAGGCCGATTGGGCCCTGCGATGGA 4504099 Query 50257 CTaaaaacaaaaaaCTTACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTG 50316 | |||| || || || ||| | ||| | || || |||||| || || ||| Sbjct 4504098 TTTCGGACAAGAACTCCACCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTA 4504039 Query 50317 TGtttttttCCGGTAGCTTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCG 50376 | || ||| |||| |||||| |||| || | | || | || | ||||||| Sbjct 4504038 TCTTCTTTAGCGGTGCTTTTGCATCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCG 4503979 Query 50377 GCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGT 50436 ||||||| || ||||||| | || || || ||||| || | ||||| |||||||| | Sbjct 4503978 GCCTCACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGCCT 4503919 Query 50437 GTTTGTACTACAATACGCGCGTAAATGAAAAATTATCA--TACGAAACAATTTTGGACAT 50494 || | | | || | ||| | | | || | || | || | || | ||| Sbjct 4503918 GTCTCT--TGCACT-CGCACCT--CCGCAACCGTGCCAGCAAGGAGTCGATCCGAGCCAT 4503864 Query 50495 GTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTG-GCAT 50553 ||| || ||||||| |||||| | |||||||| || || || | ||||| || Sbjct 4503863 CATCACCGATGCCGTCGCCATCGAGCAGGAGTTTTTGACCGAGGCCCT-GCCGTGTGCCC 4503805 Query 50554 TGTTGGGCATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGAC 50606 || ||||||||||| | | ||||| ||||||| ||||| || || ||| Sbjct 4503804 TGCTGGGCATGAACTCCACCCTGATGAAGCAGTACATCGAGTTCGTCGCCGAC 4503752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488543822902800