Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8 212 8e-50 seq1 131 2e-25 >seq8 Length=1130364 Score = 212 bits (234), Expect = 8e-50 Identities = 920/1427 (64%), Gaps = 45/1427 (3%) Strand=Plus/Minus Query 110681 AACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCA 110740 || ||||| || ||| || || | |||||||||| | ||||| || || |||||||| Sbjct 758554 AATTCACCGGCCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCATTCG 758495 Query 110741 TTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTA 110800 || || || | ||| || | |||| ||| || ||||| || || | || | ||||| Sbjct 758494 TTGTTGCCGAGGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACCAGCAAGCTGTTG 758435 Query 110801 CGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTGAGCTTG 110857 || || || | ||||||||| | ||||| | ||||| || | || | | | Sbjct 758434 CGGAGGCCGTGCTCCTTGATCTGCTCCTTCAAGGAGTCCCACTCCCACAGGTCGGAC--G 758377 Query 110858 GTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAG 110917 | || || | |||||||||| ||||||| | || | || || ||||| |||| || Sbjct 758376 GCTTGACGT-CCCACATGTCGTACTGAAGAATGCCCTCCGAGGCAGGAGATCCCTTGAAC 758318 Query 110918 GTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATAC 110977 | | ||||| |||| | | | || | || | ||||| || |||||||| || Sbjct 758317 GATGAATAGGGGCCTTCGACCTTGGCGATCTCCATGGAGGCCTCGAGAGATGCGTGGTAG 758258 Query 110978 ATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC-AAATGCGTA-GC 111035 ||||| || ||||| |||| ||| || || || || ||| || | || Sbjct 758257 ATGGTCTCGAAGATCTTCTTGTTCAGCTCGCGAGCCTCGGGGGACTCGAAAGGCATTCGC 758198 Query 111036 GGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCA 111095 | ||| || | || |||||||| || ||||| | || || || | ||| |||| Sbjct 758197 AGGGCAAGG--AAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGGGGCGGTGGCGCA 758140 Query 111096 TATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGAT 111155 | || || | || || || || || || ||| |||| || ||| || | Sbjct 758139 TGTTGCTGTTCCAGGCCTCCTGGACCGGGTAGTGGTTCACGTCGATGATTCTGTTGAGGT 758080 Query 111156 TTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTT 111215 | || | ||| |||| || || || || | | ||| | || | | Sbjct 758079 TGCGAACGACGACCTTGGTGACCTCGTGGAGCTTCTGGAAGTCATAGCAGCCCTCATTGT 758020 Query 111216 CATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTAT 111275 | ||| | || ||||| | || |||| ||||| || ||| ||| || Sbjct 758019 AGTCGACGAATGCCGGCAGGGCCAGGGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGG 757960 Query 111276 CTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTT 111335 | | |||||| | || || || || | |||||| || ||||| || | ||||| | Sbjct 757959 CGGAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCT 757900 Query 111336 GGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCT 111395 |||| |||||| ||||||| || |||||||| |||||| |||| | || |||||||||| Sbjct 757899 GGTTGCTCTTCCTGTTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCT 757840 Query 111396 GTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGT 111451 | | | ||| || | | ||| | | || ||| | ||||| || |||| || Sbjct 757839 GGGCCTCGAGGATGGAGTACCACAGCTTCTGCGCACG----AATGGTCTTGCGGCCACGG 757784 Query 111452 CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGA 111511 |||||| ||||||||| ||| ||||| || ||||| | || ||||| ||| Sbjct 757783 CCCTCCTTTTCGTACTTTTCGTACAGGGCCTCGAACTCTTGGCCGTAGCAGTCGGCGAGG 757724 Query 111512 CCTGGTGCCTT-GTCTGGACAGAAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCA 111569 || || || || || || || | || | ||| | || ||| ||| || ||||||| Sbjct 757723 CC-GGGGCATTCGTTGGGGCACATGAGCGTCCAGTCGAGGTTCTT-CTCGACACGCTTCA 757666 Query 111570 TGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCA 111628 |||| || || || ||||| |||| || || || | ||| || |||| || | Sbjct 757665 TGAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGA-CCTCCTCCTTG 757607 Query 111629 CCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAG 111688 || ||||| || || || |||||||| | || || |||||||| |||||||| ||| Sbjct 757606 CCATGGTTCTTGCGCAAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAG 757547 Query 111689 ACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGC 111741 | ||||| | || ||| | | ||||| || | || || | || ||| Sbjct 757546 ATTGCGAAGGCGCCGGGGCGCTTGTTGCCGCCC----TGGTCGACGTATCTGGCGGTGTT 757491 Query 111742 GTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTG-TCCCCCGA-ATA 111799 ||| | ||||| ||||| |||||||| || | || ||||| | ||| ||| ||| Sbjct 757490 GTTGTAGACGCGGAGCATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATA 757431 Query 111800 CGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAG 111859 ||| | |||| | | |||| || || || || || |||||| ||| ||| Sbjct 757430 GGAG--CCAGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAG 757373 Query 111860 ATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCG 111919 || || ||| | | || || | ||||| || | ||| ||| ||||| || || Sbjct 757372 ATCATGGCGCACGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCG 757313 Query 111920 ATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGT 111978 | | |||||| ||||| ||| || || || || || || ||||||||||| || | Sbjct 757312 ACCAAGAAGCACGAGGACAGCTG-GGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGA 757254 Query 111979 TGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATG 112036 ||||| ||| | | |||| |||||| | ||||||||| | ||| || ||| Sbjct 757253 CGCGTGCGTGA--AGAACTTGCTGGACATGAGATTGTATGTCTCGAGGACTCGCTCGATG 757196 Query 112037 TCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083 || || || |||||||| ||||| | ||||| ||||| ||| || Sbjct 757195 TCGTCTCCCCAGATGCCGACGGCGACTCTCATGATCATGTGCTGAGG 757149 >seq1 Length=5717297 Score = 131 bits (144), Expect = 2e-25 Identities = 528/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Plus Query 122370 ATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 122429 |||||| ||||| ||||||||||||||||||||||| || | ||| ||||| ||||| Sbjct 4503632 ATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCAT 4503691 Query 122430 AAAGTCAAATGGATTCTTCGCGTTCCAAATGGG-TGGCACCCCAACTTGTTTGAGGAGAC 122488 ||||| || || || | ||||| | || | | || | | | |||||||| Sbjct 4503692 GAAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGAT-GAGGAGAC 4503750 Query 122489 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 122548 | || | || |||| ||||||| |||| |||||||| || | ||| || Sbjct 4503751 GGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCAC 4503810 Query 122549 ATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGT 122608 | || || || || | ||| | | ||| || | || || || | | |||||| Sbjct 4503811 ACGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTC 4503870 Query 122609 GGATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTG---AAGAGCTCCACGGCAAACT 122665 |||| | || | ||| | || || | | | ||||| || |||||| | Sbjct 4503871 GGATCGACTCCTTGCTGGCACGGTTGCGGAGGTGCGAGTGCAAGAGA--CA-GGCAAAGT 4503927 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 || |||||||||||| || || || || || || || |||||| || || ||||||| Sbjct 4503928 CCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 4503987 Query 122726 GACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATACCCTCC 122784 |||| |||||||| | ||| |||| | ||| || | ||| |||||||||||||| Sbjct 4503988 GACCGCGCTTCTTGAGCCAGAAAATGGATGCA-AAAGCACCGCTAAAGAAGATACCCTCG 4504046 Query 122785 ACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTT 122843 || ||||| |||| || || | ||| |||| | ||| ||| | || |||| Sbjct 4504047 ACGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTG-GAGTTCTTGTCCGAAATCCATCG 4504105 Query 122844 CATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTG 122903 || ||||| | |||||||| || || || | || | || ||| | || | || Sbjct 4504106 CAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTG 4504165 Query 122904 CTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATG 122963 | || | | ||||| ||||| ||||||| | || || || ||| || Sbjct 4504166 CGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTG 4504225 Query 122964 AACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCT 123022 | | | ||| ||| | || | ||||||| | || || || ||||| |||| Sbjct 4504226 GATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCT 4504284 Query 123023 CATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAAT 123081 | ||||| ||| | | | | ||||| ||||||||||| || | |||||||| Sbjct 4504285 C-TCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAG 4504343 Query 123082 GCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCA 123138 || ||||||| ||||| | ||||| | || |||| || | |||||||||| | Sbjct 4504344 GCGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGTGA 4504403 Query 123139 AGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 || ||||||| || | ||||| || ||||| Sbjct 4504404 GTGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCA 4504438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031772338400