Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8 214 2e-50 seq1 172 7e-38 seq3 89.7 6e-13 >seq8 Length=1130364 Score = 214 bits (236), Expect = 2e-50 Identities = 1066/1680 (63%), Gaps = 37/1680 (2%) Strand=Plus/Minus Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864 ||||||| ||||| ||| |||| | || ||||||||||| ||||||||||| | Sbjct 758904 TGAACTGGATGGGGGCCGCAGCAGCCTGCGTGCGTAGGTAGTACATGCCCGTCTTGAGGC 758845 Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924 | |||||||| | | ||||| | | |||| | ||| || | |||| Sbjct 758844 CGAGCTTCCAGCCGGTGAAGTGCATGCTCGTGATCTTGCCCATGGTCGGGTCCTTCATGT 758785 Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984 || ||| | || || || ||||||||| || || ||||| ||||| | | | Sbjct 758784 GGATGTTGAGGGACTGAGACTGGTCGATGAAGGCGCCGCGGTCCGCGGCCATCTGGACGA 758725 Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044 | | ||| |||||||| ||| |||| || ||| || | | | ||| | Sbjct 758724 TCTGGCGCTGGGAGATCTCCCACACCGTCTTGTACAGCGCCTTGATCTGGGCCGAGATGT 758665 Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 118104 ||| ||||||||||| ||| | | || ||| | | |||||| | | |||| Sbjct 758664 TGGGGATGTTTTGGATGGAGCCATTCTCAGCGATGATGCGGTTCTTCATGGCGTCGGACC 758605 Query 118105 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCG 118164 | ||||| | || |||| | || ||||| || || ||||| | Sbjct 758604 ACAGACCCGCATCAACCAGGTCCTTGAGCAGCCAGGGGTTGACGACCTGGAATTCACCGG 758545 Query 118165 CGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCA 118224 | ||| |||| | | ||||| |||| |||||| ||||| ||||| || ||||| || | Sbjct 758544 CCAGGACTCGTCGCTGGTAGATGTTGGACGTGTAAGGCTCGAAGCATTCGTTGTTGCCGA 758485 Query 118225 AGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT 118284 ||| || | ||| ||| || |||||||| || | || | |||||| ||||| || | Sbjct 758484 GGATCTGCGAGGTGCTGGCGGTCGGCATGGGCGCGACCAGCAAGCTGTTGCGGAGGCCGT 758425 Query 118285 TTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA---GTTGAGCTTTGTCTCCCCCT 118341 ||| | || | ||||| | | |||||| || | || | | | || | | Sbjct 758424 GCTCCTTGATCTGCTCCTTCAAGGAGTCCCACTCCCACAGGTCGGAC---GGCTTGACGT 758368 Query 118342 GCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATG 118401 |||||| || |||| || || || | || || || ||||||| || | ||| | Sbjct 758367 CCCACATGTCGTACTGAAGAATGCCCTCCGAGGCAGGAGATCCCTTGAACGATGAATAGG 758308 Query 118402 GGCCCTCAACCTCCGCCAATTC---GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458 |||| || |||| || | || |||| |||||||| | |||||| || || || | Sbjct 758307 GGCCTTCGACCTTGGCGATCTCCATGGAG---GCCTCGAGAGATGCGTGGTAGATGGTCT 758251 Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAA 118518 | || || |||| | |||||| ||| || || | | ||| || Sbjct 758250 CGAAGATCTTCTTGTTCAGCTCGCGAGCCTCGGGGGACTCGAAAGGCATTCGCAGGGCAA 758191 Query 118519 TAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 118578 || | || |||||||| || ||||||| ||| || ||||| || | ||| || | Sbjct 758190 GGAAGGCGTCGGCGAGACCCTGCACACCGACGCCGATGGGGCGGTGGCGCATGTTGCTGT 758131 Query 118579 TCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGA 118638 ||| || || || || || ||| ||||| | || || || || || Sbjct 758130 TCCAGGCCTCCTGGACCGGGTAGTGGTTCACGTCGATGATTCTGTTGAGGTTGCGAACGA 758071 Query 118639 CAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT 118698 | ||||| |||| || || ||||| | | | ||| | | || | | | ||| Sbjct 758070 CGACCTTGGTGACCTCGTGGAGCTTCTGGAAGTCATAGCAGCCCTCATTGTAGTCGACGA 758011 Query 118699 ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACT 118758 | || ||||| | |||||||| || || || | ||| || | | ||||| Sbjct 758010 ATGCCGGCAGGGCCAGGGACGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCGGAGTACT 757951 Query 118759 CTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT 118818 | || || || ||||| | ||| || || || || || | |||||| || || || Sbjct 757950 CGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATCGTTCCTAGGTTCTTCTGGTTGCTCT 757891 Query 118819 TTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGA 118878 | |||| || || |||||||| |||||| | || | || |||||||| |||| || || Sbjct 757890 TCCTGTTGCAGGCGTCCTTGTACAGCATGAAGGGGTTGCCGGTCTCCGTCTGGGCCTCGA 757831 Query 118879 GAATAGCCTTCCAGACATCGGCAGCTGGCAC-AGTGGCGTTGG---CTCGCCCCTCTTCC 118934 | || | | ||| || | | || |||| | ||| ||| | || ||||| | Sbjct 757830 GGATGGAGTACCA--CAGCTTCTGC--GCACGAATGGTCTTGCGGCCACGGCCCTCCTTT 757775 Query 118935 TCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCC 118994 ||||||||| ||| ||||| || ||||||| || | || | ||| || || || Sbjct 757774 TCGTACTTTTCGTACAGGGCCTCGAACTCTTGGCCGTAGCAGTCGGCGAGGCCGGG-GCA 757716 Query 118995 TTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 119053 || |||| || | ||| | ||| | || ||| || |||||||||||||| || Sbjct 757715 TTCGTTGGGGCACATGAGCGTCCAGTCGAGGTTCTTCTCGACACGCTTCATGAAGAGATC 757656 Query 119054 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 119113 ||||||||||| ||| ||| || ||||| || | || || | || || || Sbjct 757655 GGGGATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACCTCCTCCTTGCCATGGTTCTT 757596 Query 119114 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 119173 ||||| || | || || | || || |||||||| || || ||||| | |||| | Sbjct 757595 GCGCAAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATTGCGAAGGC 757536 Query 119174 CCC------CTTACGACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACG 119227 || ||| | | || |||||| || || || || ||| ||| | || || Sbjct 757535 GCCGGGGCGCTT--GTTG-CCGCCCTGGTCGACGTATCTGGCGGTGTTGTTGTAGACGCG 757479 Query 119228 AAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCC-CGA-ATACGAGACTTATTG 119285 ||||| ||||| || || | ||| ||||| || || ||| ||| ||| | | || Sbjct 757478 GAGCATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATAGGAGCC--AGTG 757421 Query 119286 GCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 119345 || | || ||||| || || ||| || || || ||| ||| ||||| |||||| Sbjct 757420 GCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGCGCAC 757361 Query 119346 TCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAG 119405 | |||| || ||||||| || ||||| ||| |||| | ||| | |||||| Sbjct 757360 GTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGAAGCAC 757301 Query 119406 CTCGACATTTGAGGCCTGGGTG-TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 |||| || |||||||| | | || ||||||||||| || || | |||||| |||| Sbjct 757300 GAGGACAGCTG-GGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCGTGAA 757242 >seq1 Length=5717297 Score = 172 bits (190), Expect = 7e-38 Identities = 535/814 (66%), Gaps = 17/814 (2%) Strand=Plus/Plus Query 129727 ATAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 129786 |||||| || || |||||||| |||||||| ||||| ||| | | | ||| |||||||| Sbjct 4503632 ATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCAT 4503691 Query 129787 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGAC 129845 || || || ||||| | | ||| | || | || | | | | | |||||||| Sbjct 4503692 GAAGTCGAAGGGGTTGGTGGCGTTGTAGATCTTCTCGTTGCCGAGGGCGAT-GAGGAGAC 4503750 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | || | |||| |||| ||||||| |||| ||||||||| || | ||| || Sbjct 4503751 GGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAGGGCAC 4503810 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 | || || || || | ||| ||| ||| ||| | || || || | |||||| Sbjct 4503811 ACGGCAGGGCCTCGGTCAAAAACTCCTGCTCGATGGCGACGGCATCGGTGATGATGGCTC 4503870 Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTG---AAGAGTTCCACGGCAAACT 130022 | || | |||| ||| | | ||||| | | | ||||| || |||||| | Sbjct 4503871 GGATCGACTCCTTGCTGGCACGGTTGCGGAGGTGCGAGTGCAAGAGA--CA-GGCAAAGT 4503927 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 || |||||||||||||||||| |||||||| || || |||||| || || ||||||| Sbjct 4503928 CCGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGA 4503987 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 |||| |||||||| | ||||||||| | ||| | || |||||||| ||||| | Sbjct 4503988 GACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAGATACCCTCGA 4504047 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTC 130201 | || || |||| |||||||| ||||||| | | | |||| ||| ||| | Sbjct 4504048 CGGCGGCAAAGGCAACGAGACGCTGGGCAAAGGTG-GAGTTCTTGTCCGAAATCCATCGC 4504106 Query 130202 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 130261 | ||||| | ||||| || ||| || || | || | || || | ||||| | | Sbjct 4504107 AGGGCCCAATCGGCCTTCTTGCGGATGCAGGGAATCGTGTCGACGGCGTTGAAGAGGTGC 4504166 Query 130262 TTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGG 130321 || | | | || |||||||| | || ||||| || || || ||| ||| Sbjct 4504167 GTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGAGTAGGTCTCGGAGTGG 4504226 Query 130322 ACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTC 130380 | | | ||| || | ||| | ||||||| | || || || ||||| ||||| Sbjct 4504227 ATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCACCGGGCCTCAGGGATCTGGACCTC 4504285 Query 130381 ATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACG 130439 || || ||| | | | | ||||| ||||||||||| || | ||||| || | Sbjct 4504286 -TCCGCTGAATCGCTCAACCAGGTTCTCGTTGACAATTCCATCAGAGGCGGCAAAGAAGG 4504344 Query 130440 CCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAA 130496 | ||||| | ||||| | | ||| | |||||||| || | |||||||||| | Sbjct 4504345 CGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCGTTCAGGCGGTTGTTCCAGTCGTGAG 4504404 Query 130497 GATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 ||||| || || || | ||| || || ||||| Sbjct 4504405 TGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCA 4504438 >seq3 Length=3706406 Score = 89.7 bits (98), Expect = 6e-13 Identities = 194/288 (67%), Gaps = 8/288 (3%) Strand=Plus/Plus Query 179062 GCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATA 179121 ||||| |||||| ||| | || ||||| | ||||| |||| | || | ||||||| Sbjct 2656314 GCATCGGAGCCACCGGCGAGCCTCGAACCAAAGTTACCACTTGGCACCAGAACATTGATA 2656373 Query 179122 TTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCA 179181 |||||||| || | |||| | |||| || || || | | |||||||||||| Sbjct 2656374 TTGTTTGATCCGACAAAGTCCTGAGCCATACCGATGATTGTCTGCTGGAGGGAGACTTCG 2656433 Query 179182 CCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTCA 179241 || || |||||||| | || | | || || | ||||| ||| ||||| || Sbjct 2656434 CCATGGTGGTAAGCGGTCTGCTGAGAAACGTAACCGTGCAACTCCGCGACCTTGAT---G 2656490 Query 179242 TCCTTGA----GGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAG 179297 ||||||| | ||| | | ||| || || |||| || || | || |||||||| Sbjct 2656491 TCCTTGACTCTGTTTCCT-TTGAAACAGGCGTACAGGACTTTGCGCTGACCAGGCTTGAA 2656549 Query 179298 GCCGTCGGCCATGTGCGCGATGGAACGCTTCAAGTCTGCCAAGCTGAA 179345 |||||| |||| || |||||| ||| | ||| |||| |||||| Sbjct 2656550 ACCGTCGATCATGGACGGGATGGATCGCATGTTGTCGGCCATGCTGAA 2656597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434975817240