Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq8 214 2e-50 seq1 149 7e-31 seq3 87.8 2e-12 >seq8 Length=1130364 Score = 214 bits (236), Expect = 2e-50 Identities = 926/1438 (64%), Gaps = 41/1438 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| ||||| ||||| | || ||| |||| || || || ||||| || ||| Sbjct 757149 CCTCAGCACATGATCATGAGAGTCGCCGTCGGCATCTGGGGAGACGACATCGAGCGAGTC 757208 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||||||| | |||||| |||| | | ||| ||||| | || ||||||| Sbjct 757209 CTCGAGACATACAATCTCATGTCCAGCAAGTTCT--TCACGCACGCGTCTCCCACCCTCT 757266 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || || || || |||| ||||| |||||| | ||| || ||||| | Sbjct 757267 TCAACGCCGGAACCCCCCAGGCCCAGCTGTCCTCGTGCTTCTTGGTCGACATGAAGGACG 757326 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || ||| | || ||||| | || || | | ||| || ||||| ||| ||||| Sbjct 757327 ACAGCATCGAGGGCATCTACGACACCCTCAAGACGTGCGCCATGATCTCCAAGATGGCTG 757386 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGA-C 104517 | || || || || || |||| | | |||| | ||| ||| ||| ||| | Sbjct 757387 GTGGCATCGGTCTGAACGTCCACCGCATCCGTGCCACTGG--CTCCTATATCGCCGGAAC 757444 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 ||||| || | || |||||||| ||||| ||||| | ||| ||| || | || Sbjct 757445 CAATGGAACCTCCAACGGCATTATTCCCATGCTCCGCGTCTACAACAACACCGCCAGATA 757504 Query 104578 TGTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCAT 104630 || | || ||||| | | ||| || | ||||| |||| |||||||| | Sbjct 757505 CGTCGACCA----GGGCGGCAACAAGCGCCCCGGCGCCTTCGCAATCTACCTTGAGCCCT 757560 Query 104631 GGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGC 104690 ||||||| || || | |||||||| || ||||| ||||| || | ||||||| | Sbjct 757561 GGCACGCCGACGTCTTCGAGTTCCTCGACTTGCGCAAGAACCATGGCAAGGAGGAGGTCC 757620 Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | ||| || || ||| || |||||||| || ||||||||||||||| | || ||| Sbjct 757621 GTGCCCGGGACCTGTTCCTGGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGA 757680 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTG 104809 ||| | | ||| | ||| | || || || || || || || ||| |||| | Sbjct 757681 AGAACCTCGACTGGACGCTCATGTGCCCCAACGAATGC-CCCGGCCTCGCCGACTGCTAC 757739 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGAC 104868 || | ||||| || ||||| ||| ||||||||| | || || || ||| | ||| Sbjct 757740 GGCCAAGAGTTCGAGGCCCTGTACGAAAAGTACGAAAAGGAGGGCCGTGGCCGC-AAGAC 757798 Query 104869 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 | | || || || | ||||| | | || ||| || | || || ||||| || | | Sbjct 757799 CATTCGTGC-GCAGAAGCTGTGGTACTCCATCCTCGAGGCCCAGACGGAGACCGGCAACC 757857 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 | | |||||| ||||| |||||||| ||| ||||| || || ||||| | || || Sbjct 757858 CCTTCATGCTGTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAACCTAGGAACGA 757917 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 || || ||||| ||||| || || ||| | || | | | | || ||| ||| | Sbjct 757918 TCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTCCGCCCCCGACGAGGTGGCCG 757977 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGA-TCCAGAGACAAAGACATTT 105106 | || ||||| || || | || || || | || || | || || | | | Sbjct 757978 TCTGCAACCTGGCGTCCCTGGCCCTGCCGGCATTCGTCGACTACAATGAGGGCTGC-TAT 758036 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | || |||||||| || || || ||| ||||| |||||| | || Sbjct 758037 GACTTCCAGAAGCTCCACGAGGTCACCAAGGTCGTCGTTCGCAACCTCAACAGAATCATC 758096 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 || || ||||| || || || | || || ||| | ||||| || || Sbjct 758097 GACGTGAACCACTACCCGGTCCAGGAGGCCTGGAACAGCAACATGCGCCACCGCCCCATC 758156 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTT-GATT 105284 || ||||||| ||||||||||| || | ||| || | || || | || ||| || | Sbjct 758157 GGCGTCGGTGTGCAGGGTCTCGCCGACGCCTTCCTTGCCCTG-CG-AATGCCTTTCGAGT 758214 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 || ||| || || | || | || || |||||||| || ||||| |||| | Sbjct 758215 CCCCCGAGGCTCGCGAGCTGAACAAGAAGATCTTCGAGACCATCTACCACGCATCTCTCG 758274 Query 105345 AGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 |||| | || ||| | || |||| || || || ||| | | || |||| ||||| Sbjct 758275 AGGC--CTCCATGGAGATCGCCAAGGTCGAAGGCCCCTATTCATCGTTCAAGGGATCTCC 758332 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA---GACCAAGCTTCACTA 105459 || || | || | ||||| | || |||||||| | | | || | || | Sbjct 758333 TGCCTCGGAGGGCATTCTTCAGTACGACATGTGGGACGTCAAGCCGTCCGACCT---GTG 758389 Query 105460 CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCAT 105519 || ||||| | | ||||| | ||||||||| | || || || ||||| | || | Sbjct 758390 GGAGTGGGACTCCTTGAAGGAGCAGATCAAGGAGCACGGCCTCCGCAACAGCTTGCTGGT 758449 Query 105520 GGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 105579 || || ||||| || ||| |||| | || ||| | || || || |||||||| || || Sbjct 758450 CGCGCCCATGCCGACCGCCAGCACCTCGCAGATCCTCGGCAACAACGAATGCTTCGAGCC 758509 Query 105580 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 |||||| | |||||||| | | || || ||| || || || || | | |||||| Sbjct 758510 TTACACGTCCAACATCTACCAGCGACGAGTCCTGGCCGGTGAATTCCAGGTCGTCAAC 758567 >seq1 Length=5717297 Score = 149 bits (164), Expect = 7e-31 Identities = 355/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||| || |||||| | || || || ||||| |||| ||||| | | | || Sbjct 4504438 TGGACCGCCGAAGAGATCGACCTGTCCAAGGACACTCACGACTGGAACAACCGCCTGAAC 4504379 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || | ||||| | ||||| ||||||| || |||||||| | || ||||||||| Sbjct 4504378 GAGGACGAAAAATACTTCATCTCCCACATCCTCGCCTTCTTTGCCGCCTCTGATGGAATT 4504319 Query 94558 GTTTTTGAGAATATCAATAA-CAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGAT 94615 || ||||| | | | | | | || || ||||| || |||| |||| || | | Sbjct 4504318 GTCAACGAGAACCTGGTTGAGCGATTCAGCGGA-GAGGTCCAGATCC-CTGAGGCCCGGT 4504261 Query 94616 CCTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC 94674 |||||| | | ||| |||| ||| | | | || ||||| ||| ||| Sbjct 4504260 GCTTCTACGGTTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACCTACTCCCTCCTC 4504202 Query 94675 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 94734 || |||| || || ||||| || || || ||| ||||| | ||| || | || Sbjct 4504201 ATTGACACCTACATCAAGGACACCGCCCAGCGGACGCACCTCTTCAACGCCGTCGACACG 4504142 Query 94735 GTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGG-TTTGATACAAAGTCGCG 94793 |||| || || | ||||| || |||||||| || ||| ||| |||| | | Sbjct 4504141 ATTCCCTGCATCCGCAAGAAGGCCGATTGGGCCCTGCGATGGATTTCGGACAAGAACTCC 4504082 Query 94794 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 94853 ||||||| |||| ||| | || ||||| || |||||||||||||| ||| | Sbjct 4504081 A-CCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTTAGCGGTGC 4504023 Query 94854 CTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 || ||| | |||| |||||||||||||| ||||||||||| || ||| |||||||| Sbjct 4504022 TTT-TGCATCCATTTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCCTCACCTTCTCCA 4503964 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||| ||||||||||||||||| |||||| || ||||| Sbjct 4503963 ACGAGCTCATCTCTCGTGACGAGGGTCTCCACACGGACTTTGC 4503921 Score = 89.7 bits (98), Expect = 6e-13 Identities = 185/270 (69%), Gaps = 8/270 (3%) Strand=Plus/Plus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || ||||| || ||||||| |||||| ||| || | ||| | | | ||||| Sbjct 1431607 GGCGTCGATCTCGTCGATGAAGATGATGCACGGTGCGTTCTTGCGTCCCTCGGCGAAGAG 1431666 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821 || || || || | ||| || || ||||||||||| ||||| | | | || || Sbjct 1431667 GTCGCGGACCCGTGACGGGCCGACGCCGACAAACATCTCGACAAACTCGGAGCCGCTCAC 1431726 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 || | |||||| || || || ||||| |||| |||||| || |||||||||| Sbjct 1431727 GCTGAA-GAAGGGCACGCCGGACTCGCCCGCCGTGGCCTTGGCGAGCAGCGTCTTACCCG 1431785 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9938 | || || || ||||||| ||| || || || |||||||| || |||| | || | Sbjct 1431786 TCCCCGGGGGGCCGGCGAGGATGGCGCCCCGCGGGATCTTGGCCCCGAGCTTCTCGAACT 1431845 Query 9939 ATCTCTCAGGTTGCTTAAGAAAATCCACAA 9968 |||| |||||||| || || ||||| Sbjct 1431846 ---TCTCGGGTTGCTTCAGGAAGCTCACAA 1431872 >seq3 Length=3706406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 202/300 (67%), Gaps = 16/300 (5%) Strand=Plus/Plus Query 168464 CCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATTGTTTGAA 168523 ||||| ||| | || |||||| | ||||| ||| | |||| ||||||||||||||| Sbjct 2656323 CCACCGGCGAGCCTCGAACCAAAGTTACCACTTGGCACCAGAACATTGATATTGTTTGAT 2656382 Query 168524 CCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACTTCACCGTGGTGG 168583 || | |||| | |||| || || || | | ||| |||||||| || |||||| Sbjct 2656383 CCGACAAAGTCCTGAGCCATACCGATGATTGTCTGCTGGAGGGAGACTTCGCCATGGTGG 2656442 Query 168584 TACGCACTCTTCTCTGCGACAAATG---CCG-CCAACTGCGCCACTTTCATCTCATCCTT 168639 || || ||| || || ||| | ||| ||||| ||| || || || ||||| Sbjct 2656443 TAAGCGGTCTGCT----GAGAAACGTAACCGTGCAACTCCGCGACCTTGAT---GTCCTT 2656495 Query 168640 GA----GATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCAT 168695 || | ||| | | ||| || ||||||| || ||||| || |||||||| ||| | Sbjct 2656496 GACTCTGTTTCCT-TTGAAACAGGCGTACAGGACTTTGCGCTGACCAGGCTTGAAACCGT 2656554 Query 168696 CCGCCATGTGTGCGATAGAACGCTTCAAGTCCGCCAAACTGAAGTTGACGAGGTCCTTGT 168755 | |||| | ||| || ||| | ||| |||| ||||| || ||| ||||||| Sbjct 2656555 CGATCATGGACGGGATGGATCGCATGTTGTCGGCCATGCTGAACAGGATGAGCTCCTTGT 2656614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260588567960