Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq8 266 4e-66 seq3 113 5e-20 seq1 95.1 1e-14 >seq8 Length=1130364 Score = 266 bits (294), Expect = 4e-66 Identities = 519/762 (68%), Gaps = 6/762 (1%) Strand=Plus/Plus Query 53180 CCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTC 53239 |||||| | | ||||| | |||||| | || ||| || |||||| | ||| ||| Sbjct 757149 CCTCAGCACATGATCATGAGAGTCGCCGTCGGCATCTGGGGAGACGACATCGAGCGAGTC 757208 Query 53240 CGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTC 53299 | ||||| ||| | | ||| | |||| ||| |||||||| | || ||||| ||| Sbjct 757209 CTCGAGACATACAATCTCATGTCCAGCAAGTTCTTCACGCACGCGTCTCCCACCCTCTTC 757268 Query 53300 AACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGAC 53359 ||||| || || || | ||| |||| |||||| |||| | |||||||| ||| Sbjct 757269 AACGCCGGAACCCCCCAGGCCCAGCTGTCCTCGTGCTTCTTGGTCGACATGAAGGACGAC 757328 Query 53360 TCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGT 53419 ||||| ||||||||||| || |||||| ||| ||| ||||||||| | | ||| Sbjct 757329 AGCATCGAGGGCATCTACGACACCCTCAAGACGTGCGCCATGATCTCCAAGATGGCTGGT 757388 Query 53420 GGTATCGGTATCCACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGA 53477 || |||||| | || || | || ||||||| | ||| | ||| || || | Sbjct 757389 GGCATCGGTCTGAACG--TCCACCGCATCCGTGCCACTGGCTCCTATATCGCCGGAACCA 757446 Query 53478 ACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACG 53537 | || | || | || || | || ||||||||||||| ||||||||| ||| | |||| Sbjct 757447 ATGGAACCTCCAACGGCATTATTCCCATGCTCCGCGTCTACAACAACACCGCCAGATACG 757506 Query 53538 TCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACG 53597 || ||||||| || |||||| || | ||||| |||||||| ||||| ||||||| Sbjct 757507 TCGACCAGGGCGGCAACAAGCGCCCCGGCGCCTTCGCAATCTACCTTGAGCCCTGGCACG 757566 Query 53598 CCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCC 53657 ||||| | | ||||| ||||| |||| ||| || || | || ||| | || || Sbjct 757567 CCGACGTCTTCGAGTTCCTCGACTTGCGCAAGAACCATGGCAAGGAGGAGGTCCGTGCCC 757626 Query 53658 GTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACG 53717 | |||||||| || || ||||| || || ||||||||| | || |||||| || Sbjct 757627 GGGACCTGTTCCTGGCCCTCTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACC 757686 Query 53718 AGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTC-CAGGGTGTCTACGGTGAG 53776 || ||| || |||||||| ||||| |||||||||||| | | || |||||| | Sbjct 757687 TCGACTGGACGCTCATGTGCCCCAACGAATGCCCCGGCCTCGCCGACTG-CTACGGCCAA 757745 Query 53777 GAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAG 53836 ||||| | | |||| | ||||| | ||||||| | |||| | Sbjct 757746 GAGTTCGAGGCCCTGTACGAAAAGTACGAAAAGGAGGGCCGTGGCCGCAAGACCATTCGT 757805 Query 53837 GCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATG 53896 |||| || | ||| | | |||||| || |||| |||||| || | || | |||| Sbjct 757806 GCGCAGAAGCTGTGGTACTCCATCCTCGAGGCCCAGACGGAGACCGGCAACCCCTTCATG 757865 Query 53897 TGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 |||||||| | |||| ||||||||||||||||||| Sbjct 757866 CTGTACAAGGACGCCTGCAACAGGAAGAGCAACCAGAAGAAC 757907 Score = 105 bits (116), Expect = 7e-18 Identities = 549/856 (64%), Gaps = 44/856 (5%) Strand=Plus/Plus Query 55096 TGACTTTGACAAGCTTCACGAAGTGACGCGTGTTGTGACTCGGAACCTGAACCGGGTCAT 55155 |||||| | ||||| ||||| || || || || ||| ||||| ||| | |||| Sbjct 758036 TGACTTCCAGAAGCTCCACGAGGTCACCAAGGTCGTCGTTCGCAACCTCAACAGAATCAT 758095 Query 55156 CGACAAGAATTACTACCCGACTGAAGCGGCGCGCAAGTCCAACCTCCGGCACCGGCCCAT 55215 |||| ||| |||||||| | | ||| | || |||| | || ||||| ||||| Sbjct 758096 CGACGTGAACCACTACCCGGTCCAGGAGGCCTGGAACAGCAACATGCGCCACCGCCCCAT 758155 Query 55216 CGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATGCTCGGATTGCCCTTCGACTC 55275 || | ||||||| ||||| | |||||| |||| | || || |||| ||||| || Sbjct 758156 CGGCGTCGGTGTGCAGGGTCTCGCCGACGCCTTCCTTGCCCTGCGAATGCCTTTCGAGTC 758215 Query 55276 GGAACCTGCTCGAGAAATTAACCAGGACATCTTC-AGTCGCATCTACTTTGCAGCGCTCG 55334 ||||| || | ||| || | |||||| || | ||||||| ||| | |||| Sbjct 758216 CCCCGAGGCTCGCGAGCTGAACAAGAAGATCTTCGAGAC-CATCTACCACGCATCTCTCG 758274 Query 55335 AGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTACGAGACGTTCCGTGATTCGCCAG 55394 ||| || | | || | | ||| || |||| ||||| | || || | Sbjct 758275 AGGCCTCCATGGAGATCGCCAAGGTCGAAGGCCCCTATTCATCGTTCAAGGGATCTCCTG 758334 Query 55395 CTGACAAGGGACTTCTCCAGTTCGATCTATGGGGC---AAG---TCTGACCCCATG---T 55445 | |||| |||| |||| ||| | |||| | ||| || |||| | | Sbjct 758335 CCTCGGAGGGCATTCTTCAGTACGACATGTGGGACGTCAAGCCGTCCGACCTGTGGGAGT 758394 Query 55446 TTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCTACGCAACTCCCTGCTCGTGGCGC 55505 ||| |||||| | | || | | ||||| |||||| | |||| || |||| Sbjct 758395 GGGACTCCTTGAAGGAGCAGATCAAGGAGCACGGCCTCCGCAACAGCTTGCTGGTCGCGC 758454 Query 55506 CAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAACGAGGCGTTCGAGCCGTACA 55565 | ||||| ||||| || | |||||| | ||||||||||| |||||||| |||| Sbjct 758455 CCATGCCGACCGCCAGCACCTCGCAGATCCTCGGCAACAACGAATGCTTCGAGCCTTACA 758514 Query 55566 CGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAGTTTGTCATGATCAACAAGCAC- 55624 || |||||||||||| ||| || ||| || ||||| | || | || ||| | | Sbjct 758515 CGTCCAACATCTACCAGCGACGAGTCCTGGCCGGTGAAT---TCCAGGTCGTCAACCCCT 758571 Query 55625 --CTCGTCAAGGACCT-GCAGAAGATCAACAAGTGGAAC-CCGCAGATCAAGA--CGGAT 55678 || |||||||||| | || | | |||| | ||| || |||| || || Sbjct 758572 GGCTGCTCAAGGACCTGGTTGATGCGGGTC-TGTGGTCCGACGC-CATGAAGAACCGCAT 758629 Query 55679 -ATTGTGCGGAACGGGGGGTCCGTCCAGA--ATCTGGAGATTCCTCTG--CGTCTCAAGG 55733 || | ||| || ||| |||| | ||| | | ||| | | |||||| Sbjct 758630 CATCGCTGAGAA---TGGCTCCATCCAAAACATCCCCA-ACATCTCGGCCCAGATCAAGG 758685 Query 55734 AGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTG---ACATGAGTGCTG 55790 | | ||| ||||||||||||||| | | || | | ||| | | ||| || | Sbjct 758686 CGCTGTACAAGACGGTGTGGGAGATCTCCC---AGCGCCAGATCGTCCAGATGGCCGCGG 758742 Query 55791 ATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTTCAC 55850 | || || || | |||||||||||| ||||| || |||||| |||| || | || | Sbjct 758743 ACCGCGGCGCCTTCATCGACCAGTCTCAGTCCCTCAACATCCACATGAAGGACCCGACCA 758802 Query 55851 TGGCCAAGTT---GAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907 ||| |||| | |||| |||||||| ||| |||||| || ||||||||||| | Sbjct 758803 TGGGCAAGATCACGAGC---ATGCACTTCACCGGCTGGAAGCTCGGCCTCAAGACGGGCA 758859 Query 55908 TGTACTATCTGCGGAC 55923 ||||||| || || || Sbjct 758860 TGTACTACCTACGCAC 758875 >seq3 Length=3706406 Score = 113 bits (124), Expect = 5e-20 Identities = 300/453 (66%), Gaps = 4/453 (1%) Strand=Plus/Plus Query 151874 ATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAA 151933 ||||||| ||||| || || || |||||||| || | ||| |||| || |||||| | | Sbjct 2656135 ATCCGGTGCCGATACCGTCGGCGCCGTTGACGAGGACCATGGGCAGGATGGGGGCGAACA 2656194 Query 151934 ACTCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCG 151993 |||||| || | ||| | || || || | | || || | || | ||| | | Sbjct 2656195 CCTCCGGTTCGATCTGCTTGCCATCCTCGAACTGGTGCTTGAGGTTGGGGTCGTC-GAGG 2656253 Query 151994 GATC-GAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052 || ||| | | || | | || || || ||||||||||| |||| |||||| Sbjct 2656254 GAGGAGAAGACCTTGCGGGCAAAGGGGGACAGGCGGGTGAAGATGTAACGGGGGCTGGCG 2656313 Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112 ||||| |||||| || |||| || ||||| | ||| ||| | || | |||| Sbjct 2656314 GCATCGGAGCCACCGGCGAGCCTCGAACCAAAGTTACCACTTGGCACCAGAACATTGATA 2656373 Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172 ||||| | || || || | |||||||| | | || || ||| || |||| Sbjct 2656374 TTGTTTGATCCGACAAAGTCCTGAGCCATACCGATGATTGTCTGCTGGAGGGAGACTTCG 2656433 Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232 || ||||| || || ||||||| | | ||| || ||||| ||| ||||| |||||| Sbjct 2656434 CCATGGTGGTAAGCGGTCTGCTGAGAAACGTAACCGTGCAACTCCGCGACCTTGATGTCC 2656493 Query 152233 GT-CGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACC 152291 | || | ||| | |||| ||||||||| | || |||||||| || || ||||| Sbjct 2656494 TTGACTCTGTTTCCT-TTGAAACAGGCGTACAGGACTTTGCGCTGACCAGGCTTGAAACC 2656552 Query 152292 GTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||| | || | || || || ||| || |||| Sbjct 2656553 GTCGATCATGGACGGGATGGATCGCATGTTGTC 2656585 >seq1 Length=5717297 Score = 95.1 bits (104), Expect = 1e-14 Identities = 479/740 (65%), Gaps = 49/740 (7%) Strand=Plus/Plus Query 74462 ATAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCAT 74521 ||| |||||||| ||||| ||||| ||||||||||| || | | |||||||||||||| Sbjct 4503632 ATAGTCACCGACACGCTTCTCAAAGAAGTTGGTCTTGCCGCCGAGGGAGATGTTCTCCAT 4503691 Query 74522 CCAGTCGAAAGGGTTCTTTGCACCGTAAATAGGCTTCTC---CCCAAACTGTGCCATGAG 74578 ||||||| ||||| | || ||| || |||||| || | | || ||||| Sbjct 4503692 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAT---CTTCTCGTTGCCGA---GGGCGATGAG 4503745 Query 74579 G---CGATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAG 74635 | || || || || || | ||||||||| |||| | | |||||| | || Sbjct 4503746 GAGACGGTCGGCGACGAACTCGATGTACTGCTTCATCAGGGTGGAGTTCATGCCCAGCAG 4503805 Query 74636 TTTGCACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTG--GACA 74693 |||||||| |||||||| | |||||| ||| | | || | ||| | || Sbjct 4503806 GGCACACGGCAGGGCCTCGGTCAAAAACTCCTGCTCGA--TGGCGACGGCATCGGTGATG 4503863 Query 74694 AT--CTTGTGAATG--TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGT-AAAGCGTCA 74748 || || | || | || ||| ||||| || | ||||| |||| ||| | || Sbjct 4503864 ATGGCTCG-GATCGACTCCTTG--CTGGCACGGTT-GCGGAGGTGCGAGTGCAAGAGACA 4503919 Query 74749 CGGCAAACTCC-TGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGG 74807 |||||| ||| || | || || || || | || | || || || || | ||| Sbjct 4503920 -GGCAAAGTCCGTGTGGAGA-CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGG 4503977 Query 74808 CCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAG 74867 || ||||| || || |||||||| | ||| || |||| || | ||| || |||||| Sbjct 4503978 CCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGATGCAAAAGCACCGCTAAAGAAG 4504037 Query 74868 ATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCA-------TCGGA 74920 || || ||||| |||||||| || || || || || || |||| | || || Sbjct 4504038 ATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGC-AAAGGTGGAGTTCTTGTCCGA 4504096 Query 74921 AGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCAGGG-ACAGTATCGATCG 74979 | ||||| | | ||||| || || ||| | | |||||| | || |||| | Sbjct 4504097 A---ATCCATCGCAGGGCCCAATCGGC-CTTCTTGCGGATGCAGGGAATCGTGTCGACGG 4504152 Query 74980 CTTGGAAGAGGCTTGCCTTCTCT--TCGGGATCCTTGACGAGCTTGTCAATCATAAGTGA 75037 | | ||||||| ||| | | || ||| ||||||| | ||||||| | || || Sbjct 4504153 CGTTGAAGAGG--TGCGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCAATGAGGAGGGA 4504210 Query 75038 GTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTC 75097 ||| ||||| || || || ||| | | |||| | ||||||| |||| ||||| Sbjct 4504211 GTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCACCGGGCCTC 4504270 Query 75098 TGCAATCTGTAC--ATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCC 75155 | ||||| || ||| |||| ||| | | ||||| |||| || || || Sbjct 4504271 AGGGATCTGGACCTCTCCGCTGAATCGCTCA--ACCAGGTTCTCGTTGACAATTCCATCA 4504328 Query 75156 GAGGCGGCGAAAAAAGCCAG 75175 |||||||| || || || || Sbjct 4504329 GAGGCGGCAAAGAAGGCGAG 4504348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215801634200