Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 3e-15 >seq4 Length=2575654 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/226 (71%), Gaps = 10/226 (4%) Strand=Plus/Plus Query 34401 TGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAG-CGAA 34459 |||||||||||||||| ||||||||| | ||||||||||| || || || || | | || Sbjct 1167777 TGGGCCCGGTCTACGGCTTCCAGTGGCGGCACTTTGGGGCCGACTA-CGTGGATGCCAAA 1167835 Query 34460 GCGGACTATTCGGGACAGGGAGCGGACCAGCT-GCAGTACGTGATCGACACCTTGAAGCG 34518 | ||||| |||| || |||| || ||||| || | | || ||||||| | ||| Sbjct 1167836 ACCGACTACACGGGCCAAGGAGTCGATCAGCTCGCCG-ATGTCATCGACA---AGCTGCG 1167891 Query 34519 GAAC---CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575 ||| ||| | ||| | | || | ||| || |||||||| ||||| ||| | | Sbjct 1167892 CAACAAGCCTTACGACCGGCGCATAATCCTGTCGGCCTGGAACCCCAAGGACCTCTCCAT 1167951 Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCG 34621 ||||| ||||| || ||||||| | ||| ||||||||| || Sbjct 1167952 CATGGCCCTCCCGCCATGCCACATGTTTGCCCAGTTCTACGTCTCG 1167997 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/226 (71%), Gaps = 10/226 (4%) Strand=Plus/Minus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || ||||| ||||| | | ||| ||||| Sbjct 1167997 CGAGACGTAGAACTGGGCAAACATGTGGCATGGCGGGAGGGCCATGATGGAGAGGTCCTT 1167938 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGG---GTTCCGCTTCAAGGTGTC 6840 |||||||| || ||| | || | | ||| | ||| ||| ||| | |||| Sbjct 1167937 GGGGTTCCAGGCCGACAGGATTATGCGCCGGTCGTAAGGCTTGTTGCGCAGCT---TGTC 1167881 Query 6841 GATCACGTACTGC-AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCG-CTCCCCCGA 6898 ||| || | | || ||||| || |||| || |||| ||||| | || | | || || Sbjct 1167880 GATGACAT-CGGCGAGCTGATCGACTCCTTGGCCCGTGTAGTCGGTTTTGGCATCCACG- 1167823 Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCA 6944 || || ||||||||||| | ||||||||| |||||||||||||||| Sbjct 1167822 TAGTCGGCCCCAAAGTGCCGCCACTGGAAGCCGTAGACCGGGCCCA 1167777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262237504880