Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Escovopsis_20weberi_20[genbank_20GCA_5F001278495.1_202015-09-02] 29 sequences; 27,200,907 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq8 113 6e-20 seq1 87.8 3e-12 >seq8 Length=1130364 Score = 113 bits (124), Expect = 6e-20 Identities = 431/671 (64%), Gaps = 12/671 (2%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCAT 76608 || || ||||| || || ||||| | | ||| || | ||||| | || || ||||| Sbjct 757723 CCGGGGCATTCGTTGGGGCACATGAGCGTCCAGTCGAGGTTCTTC-TCGACACGCTTCAT 757665 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 |||||||| || ||||| || || | || || || |||| | || || || || Sbjct 757664 GAAGAGATCGGGGATCCAGAGGGCCAGGAACAGGTCCCGGGCACGGACCTCCTCCTTGCC 757605 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| | || |||||||| | | || | ||||| || || || || || Sbjct 757604 ATGGTTCTTGCGCAAGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGAT 757545 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | | || || || || || || ||||| || | |||||||| ||||| || || Sbjct 757544 TGCGAAGGCGCCGGGGCGCTTGTTGCCGCCCTGGTCGACGTATCTGGCGGTGTTGTTGTA 757485 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 || | | ||| |||||||||||||| || || ||||| ||||| | ||||| || Sbjct 757484 GACGCGGAGCATGGGAATAATGCCGTTGGAGGTTCCATTGGTTCCGGCGATATAGGAGCC 757425 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 | ||||| || | || || || || || ||||| || ||||| | || Sbjct 757424 AGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAGCCATCTTGGAGATCATGGC 757365 Query 76909 ACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 || ||| || | ||||| ||||||||||| || || || ||| |||||| | | | Sbjct 757364 GCA-CGTCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACCAAGA 757306 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 | || |||| || || ||||| || || || | || ||||| || || | Sbjct 757305 AGCACGAGGACAGCTGGGCCTGGGGGGTTCCGGCGTTGAAGAGGGTGGGAGACGCGTGCG 757246 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCAT 77083 |||| | || || | ||||||||||| || | ||| || || || || Sbjct 757245 TGAAGAACTTGCTGGACATGAGATTGTATGTCTCGAGGACTCGCTCGATGTCGTCTCCCC 757186 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143 |||| || || ||||| | ||| | ||| |||||||| || || || ||||| Sbjct 757185 AGATG----CCGACGGCGACTCTCATGATCATGTGCTGAGGACGCTCGACGATCTTACCG 757130 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 77203 | | ||||| | || ||| || | ||| || || || || || | ||| ||| Sbjct 757129 TCGAGCTTCAAGAGATACGATCGCTCAAGAGTCTTGAAGCCGAAGTACTGGTAGTTGAAG 757070 Query 77204 TCTCTTTCGTA 77214 || || ||||| Sbjct 757069 TCCCTCTCGTA 757059 >seq1 Length=5717297 Score = 87.8 bits (96), Expect = 3e-12 Identities = 329/515 (64%), Gaps = 6/515 (1%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || ||||| || ||||| || || ||||| |||||||| || || | || Sbjct 4503960 TCGTTGGAGAAGGTGAGGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAAATGGATGCA 4504019 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 |||| || |||||| || || || || || || || || || || | || | | Sbjct 4504020 AAAGCACCGCTAAAGAAGATACCCTCGACGGCGGCAAAGGCAACGAGACGCTGGGCAAAG 4504079 Query 46792 CTGGCATCATTATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGC 46848 ||| | || | |||||| | | |||||||| ||||| || | || || Sbjct 4504080 GTGGAGTTCTTGTCCGAAATCCATCGCAGGGCCCAATCGGCCTTCTTGCGGATGCAGGGA 4504139 Query 46849 ATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCT 46908 || || || | || || ||||| | | | | || || | || || || Sbjct 4504140 ATCGTGTCGACGGCGTTGAAGAGGTGCGTCCGCTGGGCGGTGTCCTTGATGTAGGTGTCA 4504199 Query 46909 ATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAA 46968 || | || || | || || || ||||| || || ||||| || ||||| || Sbjct 4504200 ATGAGGAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAG 4504259 Query 46969 CATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACT 47028 || | || |||| ||||| |||||| | ||||| ||| || ||||| || || Sbjct 4504260 CACCGGGCCTCAGGGATCTGGACCTCTCCGCTGAATCGCTCAACCAGGTTCTCGTTGACA 4504319 Query 47029 ATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTA 47088 ||||||||| || ||||| || || | | || || || |||||||| || Sbjct 4504320 ATTCCATCAGAGGCGGCAAAGAAGGCGAGGATGTGGGAGATGAAGTATTTTTCGTCCTCG 4504379 Query 47089 GTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAG 47145 |||| || |||||||| | | || || || | || | ||||| || |||||| Sbjct 4504380 TTCAGGCGGTTGTTCCAGTCGTGAGTGTCCTTGGACAGGTCGATCTCTTCGGCGGTCCAG 4504439 Query 47146 AATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 ||||| ||||| || || || ||||| | ||| || Sbjct 4504440 AATGAGGCCTCGGCCTTCTTGTACATTTGCCAAAT 4504474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934141561280