Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 2e-17
>seq3
Length=4818847
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| |||||||| | ||| | || || ||||| || ||||| || || |
Sbjct 1796135 CCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAG 1796194
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| | | ||||| || || ||||| || | || || | ||| ||||| |||
Sbjct 1796195 AGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGA 1796254
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | ||| || || | || |
Sbjct 1796255 ATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACT 1796314
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||||||||||| || ||||| || || |||||
Sbjct 1796315 TCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| || | ||| | ||| || ||||| || ||||| ||||| |
Sbjct 1796363 CCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1796422
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| ||| || | ||||| ||||| || || || | ||||| | |||||||| |||
Sbjct 1796423 AAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGA 1796482
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| |||||| || || | | ||| ||||| | || |||
Sbjct 1796483 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACC 1796542
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||||||||| || | || ||||| || || |||||
Sbjct 1796543 TCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| |||| ||||||||||| || ||||| ||||| |
Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
||||| || | || || || ||||| || || | ||||| | ||||||||| ||
Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||||| || || | | ||| ||||| | || |||
Sbjct 1796711 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACC 1796770
Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151
|| | ||| |||||||| || ||
Sbjct 1796771 TCGAGGGTGATGGTCTTTCCCGT 1796793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422259138244592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |