Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq5 187 3e-42
seq3 132 5e-26
seq1 127 2e-24
seq6 91.5 2e-13
>seq5
Length=3814559
Score = 187 bits (206), Expect = 3e-42
Identities = 303/431 (70%), Gaps = 4/431 (1%)
Strand=Plus/Plus
Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005
|||| | ||||| || || || || ||| || |||| || || ||||| || |
Sbjct 1110846 TGTTCGATGCCATTGACACAATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGT 1110905
Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065
||||||| | || |||| | ||||| | | || ||||| || ||||| || ||||| |
Sbjct 1110906 GGATCGCGGACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAG 1110965
Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125
|| ||||||| ||||| |||||| |||| || ||| | |||| || |||||||
Sbjct 1110966 GCATCTTCTTCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGC 1111025
Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185
|||| ||||| ||| ||||||||||||||| | || |||||| ||||| ||||||||
Sbjct 1111026 CCGGTCTGACGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTG 1111085
Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245
|||| | || | | ||| || ||| ||| | || || | | || ||||
Sbjct 1111086 CCTGCCTTCTCATGCAACATCTGAAGCACAAGCCGGACCCGAAGCTCATTGAAGACATCG 1111145
Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCC-GGTGCGTCTG 117304
|||||| || |||| |||||| || ||||| ||||| || ||||| |||| |||
Sbjct 1111146 TCACCGCGGCTGTCGTGATCGAGAAGGAGTTCCTGACCGATGCTCTGCCTTGTGC-CCTG 1111204
Query 117305 CTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363
|| || | || || || | ||| || ||||||||||||||||| ||| | |||||
Sbjct 1111205 CTCGGCATGAA-CGCCAAGCTTATGCAACAGTACATCGAGTTCGTCGCTGACCGCCTGCT 1111263
Query 117364 GCTCGAGCTGG 117374
||| | ||||
Sbjct 1111264 GCTTGCTCTGG 1111274
Score = 98.7 bits (108), Expect = 1e-15
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 116634 ACAT-GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGAC 116692
|||| |||| |||||||||| || ||||| |||||||| | || || || ||
Sbjct 1110419 ACATAGTGGAACATGTACAAACGTGCGGAGGCAAGCTTCTGGACTGCGGAAGAAGTCGAT 1110478
Query 116693 CTGTCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATC 116749
|| |||||||| | ||||||| | || |||| || | || | | ||||||
Sbjct 1110479 CTCTCCAAGGATCTGCACGACTGGCACAACCGTCTGAATGATGATGAAAGATACTTCATC 1110538
Query 116750 AAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAG 116809
|| || || || || ||||||||| |||||||||||||| |||||||| | |||
Sbjct 1110539 TCCCATGTCCTTGCTTTCTTCGCCGCCTCGGACGGCATCGTCAATGAGAATCTCCTTGAG 1110598
Query 116810 CGTTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859
|||||| || | ||||| ||||| | || || || |||||||| || ||
Sbjct 1110599 CGTTTCAGCGC-CGAGGTCCAGGTTCCGGAAGCACGATGCTTCTATGGGTT 1110648
>seq3
Length=4818847
Score = 132 bits (146), Expect = 5e-26
Identities = 157/210 (75%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || |||||||| |||||||| | || ||||| ||| |
Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|| | | | | |||| ||||| || || | ||||| || ||||| ||| | |||||
Sbjct 1796529 GATACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 1796471
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|||||| || |||| ||| || || ||||| || || | |||||| | | |||||||||
Sbjct 1796470 GCAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGCGACTACAA 1796411
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||| | || || ||||| ||
Sbjct 1796410 CATCCAGAAGGAATCTACTCTTCATCTCGT 1796381
Score = 127 bits (140), Expect = 2e-24
Identities = 139/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
||||||| || ||||||||| |||| || || ||| ||| | | | | |||| |||||
Sbjct 1796795 TCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 1796737
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| |||| ||||| || ||||| || | |||||||| || || |||| ||| ||
Sbjct 1796736 TCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGT 1796677
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
||||| || || || | |||||||| | |||||||||||||||||||||| |||| |||
Sbjct 1796676 AAACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTG 1796617
Query 40891 CA 40892
||
Sbjct 1796616 CA 1796615
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| ||||| || || ||| | || || ||| | |
Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | |||| ||||| || || | ||||| |||||||| ||| | |||||
Sbjct 1796073 GACACTATCGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCA 1796015
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| ||| | |||| || ||||| |||||||| || | || || ||| || |||||
Sbjct 1796014 ACAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAA 1795955
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||| ||| || || | || |||||
Sbjct 1795954 CATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCG 1795919
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| ||||| ||| | || |||||| | |
Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|||| | | | | ||||| || || | ||||| || || || ||| | |||||
Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| ||||| || || || || | | || ||| || ||||||
Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
||||||||||| | || || ||||| |||
Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTG 1796152
>seq1
Length=6490813
Score = 127 bits (140), Expect = 2e-24
Identities = 139/182 (76%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGT 40757
||||| || || ||||||||||| ||||||||| |||| ||||| | |||||| |
Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597
Query 40758 GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| || |||||||| | |||||||| |||||
Sbjct 4921598 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACT 4921656
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| || || || || | || ||||| | ||||||||||||||||||
Sbjct 4921657 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716
Query 40878 GG 40879
||
Sbjct 4921717 GG 4921718
>seq6
Length=3558010
Score = 91.5 bits (100), Expect = 2e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842
||||| || || || || | ||||||||||| || |||| ||| ||||| || || ||
Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156
Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||| |||||||| ||||||||||||||| |||||| | || ||||| | || ||
Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCTG 445096
Query 40903 CGC 40905
|||
Sbjct 445095 CGC 445093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515219122717120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |