Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5 187 3e-42 seq3 132 5e-26 seq1 127 2e-24 seq6 91.5 2e-13 >seq5 Length=3814559 Score = 187 bits (206), Expect = 3e-42 Identities = 303/431 (70%), Gaps = 4/431 (1%) Strand=Plus/Plus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| | ||||| || || || || ||| || |||| || || ||||| || | Sbjct 1110846 TGTTCGATGCCATTGACACAATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGT 1110905 Query 117006 GGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGG 117065 ||||||| | || |||| | ||||| | | || ||||| || ||||| || ||||| | Sbjct 1110906 GGATCGCGGACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAG 1110965 Query 117066 GCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGC 117125 || ||||||| ||||| |||||| |||| || ||| | |||| || ||||||| Sbjct 1110966 GCATCTTCTTCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGC 1111025 Query 117126 CCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTG 117185 |||| ||||| ||| ||||||||||||||| | || |||||| ||||| |||||||| Sbjct 1111026 CCGGTCTGACGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTG 1111085 Query 117186 CCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCG 117245 |||| | || | | ||| || ||| ||| | || || | | || |||| Sbjct 1111086 CCTGCCTTCTCATGCAACATCTGAAGCACAAGCCGGACCCGAAGCTCATTGAAGACATCG 1111145 Query 117246 TCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCC-GGTGCGTCTG 117304 |||||| || |||| |||||| || ||||| ||||| || ||||| |||| ||| Sbjct 1111146 TCACCGCGGCTGTCGTGATCGAGAAGGAGTTCCTGACCGATGCTCTGCCTTGTGC-CCTG 1111204 Query 117305 CTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363 || || | || || || | ||| || ||||||||||||||||| ||| | ||||| Sbjct 1111205 CTCGGCATGAA-CGCCAAGCTTATGCAACAGTACATCGAGTTCGTCGCTGACCGCCTGCT 1111263 Query 117364 GCTCGAGCTGG 117374 ||| | |||| Sbjct 1111264 GCTTGCTCTGG 1111274 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 116634 ACAT-GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGAC 116692 |||| |||| |||||||||| || ||||| |||||||| | || || || || Sbjct 1110419 ACATAGTGGAACATGTACAAACGTGCGGAGGCAAGCTTCTGGACTGCGGAAGAAGTCGAT 1110478 Query 116693 CTGTCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATC 116749 || |||||||| | ||||||| | || |||| || | || | | |||||| Sbjct 1110479 CTCTCCAAGGATCTGCACGACTGGCACAACCGTCTGAATGATGATGAAAGATACTTCATC 1110538 Query 116750 AAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAG 116809 || || || || || ||||||||| |||||||||||||| |||||||| | ||| Sbjct 1110539 TCCCATGTCCTTGCTTTCTTCGCCGCCTCGGACGGCATCGTCAATGAGAATCTCCTTGAG 1110598 Query 116810 CGTTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTT 116859 |||||| || | ||||| ||||| | || || || |||||||| || || Sbjct 1110599 CGTTTCAGCGC-CGAGGTCCAGGTTCCGGAAGCACGATGCTTCTATGGGTT 1110648 >seq3 Length=4818847 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || |||||||| |||||||| | || ||||| ||| | Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| || || | ||||| || ||||| ||| | ||||| Sbjct 1796529 GATACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 1796471 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| || || ||||| || || | |||||| | | ||||||||| Sbjct 1796470 GCAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGCGACTACAA 1796411 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || ||||| || Sbjct 1796410 CATCCAGAAGGAATCTACTCTTCATCTCGT 1796381 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 ||||||| || ||||||||| |||| || || ||| ||| | | | | |||| ||||| Sbjct 1796795 TCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 1796737 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || |||| ||||| || ||||| || | |||||||| || || |||| ||| || Sbjct 1796736 TCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGT 1796677 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 ||||| || || || | |||||||| | |||||||||||||||||||||| |||| ||| Sbjct 1796676 AAACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTG 1796617 Query 40891 CA 40892 || Sbjct 1796616 CA 1796615 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| || || ||| | || || ||| | | Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| ||||| || || | ||||| |||||||| ||| | ||||| Sbjct 1796073 GACACTATCGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCA 1796015 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| || ||||| |||||||| || | || || ||| || ||||| Sbjct 1796014 ACAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAA 1795955 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| ||| || || | || ||||| Sbjct 1795954 CATCCAGAAGGAGAGCACTCTTCACTTGGTCTTGCG 1795919 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||| ||| | || |||||| | | Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| || || || ||| | ||||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||| || || || || | | || ||| || |||||| Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||| | || || ||||| ||| Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTG 1796152 >seq1 Length=6490813 Score = 127 bits (140), Expect = 2e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACA-GCGT 40757 ||||| || || ||||||||||| ||||||||| |||| ||||| | |||||| | Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597 Query 40758 GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| || |||||||| | |||||||| ||||| Sbjct 4921598 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACT 4921656 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| || || || || | || ||||| | |||||||||||||||||| Sbjct 4921657 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716 Query 40878 GG 40879 || Sbjct 4921717 GG 4921718 >seq6 Length=3558010 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| || || || || | ||||||||||| || |||| ||| ||||| || || || Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| |||||||| ||||||||||||||| |||||| | || ||||| | || || Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCTG 445096 Query 40903 CGC 40905 ||| Sbjct 445095 CGC 445093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219122717120