Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 3e-20
>seq5
Length=3814559
Score = 114 bits (126), Expect = 3e-20
Identities = 447/693 (65%), Gaps = 15/693 (2%)
Strand=Plus/Plus
Query 248808 AGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAAT 248867
|||||| | ||| | | |||| |||||| |||||||||| ||| || || || || ||
Sbjct 1503876 AGATTTCAACTACCAATATTTTGGTTTCAAGACGCTGGAGAGATCATACCTGCTGAAGAT 1503935
Query 248868 TGATG-GCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTC 248926
|| ||||| ||| |||||| |||||||||| | ||||| ||| | || || ||||
Sbjct 1503936 TGGCAAGCAAG-TCGCTGAACGACCTCAGCACATGCTCATGCGTGTGTCGGTTGGTATTC 1503994
Query 248927 ACAAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGA 248986
|| ||| || | |||| | |||||||||||| | ||| | | || | |
Sbjct 1503995 ACGGGGACGATGTTGAGAAGGCCATCGAGACGTACAACCTCATGTCTCAGAAGTGCTTTA 1504054
Query 248987 CACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGC 249045
| || ||| | || || |||||||| || || || | ||||| |||||| || |||
Sbjct 1504055 CTCACGCCTCTCCCACTCTCTTCAATGCTGGAACGCCTCAAC-CCCAGCTGTCGTCATGC 1504113
Query 249046 TTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG 249105
|| | | | ||| | |||||| |||| ||||| || ||||| || ||
Sbjct 1504114 TTCTTGATCGATATGAAGGACGACAGCATCGAGGGCATCTACGACACCCTCAAGATTTGT 1504173
Query 249106 GCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAG 249165
|| | ||| || || || || || ||||| ||| | | |||||| || |
Sbjct 1504174 GCCATGATCTCCAAGACTGCCGGAGGTATCGGCCTCAATGCCCATTGCATCCGTGCCACC 1504233
Query 249166 GGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGC 249225
||||| |||||| ||||| ||||| | | ||| || | ||| | ||||| |
Sbjct 1504234 GGTTCCTACATCTCTGGTACTAATGGCACCTCCAACGGTCTCATTCCCATGCTTCGCGTC 1504293
Query 249226 TTTGAGTCCAC----CGCCAGGTTCATCAACCAGGC--CGGGCGCCGAAAGGGGTCGTTC 249279
|| | ||| ||| | ||| | || ||| | ||| | | || | ||
Sbjct 1504294 TTCAACAACACTGCTCGCTATGTTGACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTT 1504350
Query 249280 GCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAAC 249339
||||| ||| |||| |||||||| || | || || ||| || |||||| ||||||
Sbjct 1504351 GCCATCTATCTGGAGCCATGGCACGCTGACGTCTTTGACTTCTTGAACTTGAGAAAGAAT 1504410
Query 249340 AACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCC-GACTT 249398
||||||| || | |||| || ||| | ||||| | ||| | || |||| || |
Sbjct 1504411 CACGGCAAAGAAGAGGTCCGAGCACGCGACTTGTTCTATGCCCTCT-GGACTCCGGATCT 1504469
Query 249399 GTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCC 249458
|||||| || ||| || || || ||||| || | | ||| ||| |||||
Sbjct 1504470 TTTCATGAAGCGTGTCGAGAAGAACCAAGACTGGACTCTGTTCTGTCCCCACGAAGCCCC 1504529
Query 249459 GGACCTCATCGATCTACACGGCGCCGACTTCGA 249491
|| ||| ||| | |||| | ||| |||||
Sbjct 1504530 GGGTCTCGCCGACGTCTACGGGGACGAATTCGA 1504562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073766234908416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |