Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq3 122 7e-23 seq1 95.1 1e-14 seq6 93.3 3e-14 >seq3 Length=4818847 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || |||||||| || |||||||||||||| |||||||| || || || | || Sbjct 1795922 AAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATCT 1795981 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| || || || || || ||||| ||||||||||| || || | ||||||||||| Sbjct 1795982 TCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCT 1796041 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 || || ||| || | | |||| | |||||||||| |||||||||| Sbjct 1796042 TGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGTC 1796101 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| || |||||||| || ||||||||||| Sbjct 1796102 TTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 100 bits (110), Expect = 2e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||||||||| |||||||||||| |||| ||| | || || Sbjct 1796609 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCG 1796668 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || ||||| || | ||||| ||||| ||||| | || ||||||||| | Sbjct 1796669 AGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGA 1796728 Query 45248 ATTTT 45252 || || Sbjct 1796729 ATCTT 1796733 >seq1 Length=6490813 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| || | || || ||||| || |||||||| | Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||| ||||||||||| | || ||||||||| || || ||| || Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | |||| ||| ||||| | ||| || ||||||||||| || |||||||| | Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539 Query 45327 AG 45328 || Sbjct 4921538 AG 4921537 >seq6 Length=3558010 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || |||||| || |||||||||||| ||| ||| |||| || Sbjct 445100 ACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCG 445159 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 ||||| || |||||||| |||| || || ||||||||||| | || |||||||| Sbjct 445160 AGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTGTC 445215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395075142220252