Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 459 2e-124 seq3 102 7e-17 seq1 95.1 1e-14 >seq5 Length=3814559 Score = 459 bits (508), Expect = 2e-124 Identities = 1227/1859 (66%), Gaps = 48/1859 (3%) Strand=Plus/Minus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCA---CGCGTAAAAATGTATC 22201 || || || || |||||||| ||||| |||||||||||||| |||| ||||| ||| Sbjct 1505684 GTACGGAGGTAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCCGCG---AAATGCATC 1505628 Query 22202 GACGTCAATTTTCCATAACTCGGCAAGTCCATG---TACACATTGAACGACTGACTCTGA 22258 || || | || || | ||| ||| || | | || | || || |||| Sbjct 1505627 GAGGTGATCTTGCCCATCGTTGGC---TCCTTGAGATGGATGTTCAGAGATTGGGACTGA 1505571 Query 22259 TCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGAC--ATTTCCC 22316 ||||| || || ||||| ||||| ||||| | | | | ||| | | | || |||| Sbjct 1505570 TCGATGAAAGCGCCTCGGTCGGCAGCCATCTGGAGAACAGCACG--TTGGCTGATCTCCC 1505513 Query 22317 ATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACC 22376 | || |||||||| || | |||| || ||| || ||| ||||||| || | Sbjct 1505512 AGACAGTCTTGTAGAGGGCCTTGATATCGGCCGGGATGTTGGGGATGTTCTGGACAGAGC 1505453 Query 22377 CGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAAT 22436 | | | ||||| ||| || || | ||| ||| | ||| | | || || | Sbjct 1505452 CACCGTCGGCGATGATGCGATTCTTCATGTTGTCGGACCAGAGACCAAGGTCGACCAGGT 1505393 Query 22437 CTTTGACCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTA 22494 | || | || ||| |||| || ||||| ||||| || | ||| || || || ||| Sbjct 1505392 CCTTCAGGAGCCATG--GGTTGACGACTTGGAACTCACCAGCCAACACACGACGCGAGTA 1505335 Query 22495 AATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGC 22554 ||||| || ||| | || |||||| |||| ||||| |||| ||||| | || || || Sbjct 1505334 GATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTTGCCCAAGATCTGCGAAGTGGATGC 1505275 Query 22555 GGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTT 22614 || ||||| || || | || || ||||| | | ||||| || | ||| | ||| Sbjct 1505274 AGTTGGCATGGGTGCAACGAGGAGAGAGTTGCGAACACCGTGTTTGGCAATCTCGGCCTT 1505215 Query 22615 GAGC--ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGC 22672 | | ||| ||| |||||||| || || || ||||| |||||| ||||| || Sbjct 1505214 CAACGAATC--CCAATCCCACAGGTCACTGGGAGTGACATT---CCACATGTCGTACTGA 1505160 Query 22673 A--ACACGCCGCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGG 22730 | | || | |||| | |||||||||||||| || || || ||||| | | | Sbjct 1505159 AGAATACCCTGCGAGACT--GGGCTGCCTTCGTAGGTCTCATAAGGACCCTCCTCCTTTG 1505102 Query 22731 CAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA 22790 |||||||||| || | || ||| ||| || ||||||||||||| ||| | Sbjct 1505101 CAAGTTCGCACGATGCGGTAAGGGCAGCGTGATAGATGGTCTCGAAGATTTGGACGTTAA 1505042 Query 22791 ATTCGGCGG-----CGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGC 22845 || | ||| ||| || ||| | || | ||||| | ||| || || || Sbjct 1505041 GTT-GTCGGGCTTCCGGTGAA----TCGAAAGGAAGACGCAGAGCAAGGAAGGCATCTGC 1504987 Query 22846 CATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGG 22905 | ||| || || || | ||| | ||||||| | ||| | | | ||||| || Sbjct 1504986 AAGACCTTGGACACCCAGACCAACGGGTCGGTGACGGAAATTGCTCTTTCTGGCCTCAGG 1504927 Query 22906 CAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTAT 22965 || ||||| | || ||||| | |||||||||| | || |||| | || | Sbjct 1504926 CACGGGATAATAGTTGACGTCGATGATCTTGTTCAAGTTGCGAGTGACAACCTGGGTGAC 1504867 Query 22966 NNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CGAT--TGTACAACAAACTTGTTGACGGC 23022 | ||||| || |||| ||| || | || || || | ||| Sbjct 1504866 TTCGTGAAGACGGCCGAAGTCATATTCGCCACGAGCCTGGTCCACGAAGGTGGGAAGGGC 1504807 Query 23023 GATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGT 23082 | |||||||| ||||||||||| ||||| ||| || |||| | || || ||||| || Sbjct 1504806 AAGGGAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCAGT 1504747 Query 23083 ACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGA 23142 || || ||| | ||||| ||||| || |||||||||| || ||||| | Sbjct 1504746 GCACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGC 1504687 Query 23143 ATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCA 23202 |||||||||||| ||||| || || || |||||| ||| | ||||| || ||| ||| Sbjct 1504686 ATCCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTACCA 1504627 Query 23203 CATAGTCTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACA 23261 || |||| || | | ||| ||| | | |||||||| |||||| || | ||||| Sbjct 1504626 CAGCTTCTGGGCCTTGATG-GTCTGACGCCCGCGGCCTTCTTTCTCGTATTTCTCGTACA 1504568 Query 23262 ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGA 23321 || || |||||| | ||||| |||||| || || || | || ||||| | | Sbjct 1504567 GGGCCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGACAGAACA 1504508 Query 23322 GACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGT 23381 || |||| | || || || || || |||| ||||||||||| |||| || || | Sbjct 1504507 GAGTCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGCAT 1504448 Query 23382 AGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGT 23441 |||||| ||||| || || ||||| ||||||||| |||||| |||| | ||| |||| Sbjct 1504447 AGAACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAGAAGT 1504388 Query 23442 CCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGC 23501 | || ||||| || ||||| ||||| || || | |||||| || || || | ||| |||| Sbjct 1504387 CAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGC 1504328 Query 23502 CGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGT 23561 | ||||| || || || || || ||||||||| | || | ||||| || | |||||||| Sbjct 1504327 CACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGT 1504268 Query 23562 TGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGA 23621 |||| | ||| || | | ||||| | || || | | || | | || Sbjct 1504267 TGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGA 1504208 Query 23622 AACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGC 23681 || || |||||| | | || || ||||| || || || || ||||||||||||| Sbjct 1504207 GGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGC 1504148 Query 23682 CCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCG 23741 ||||||||||||| || || | ||| |||||| || || |||| || | || |||| Sbjct 1504147 CCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCG 1504088 Query 23742 TAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGT 23801 | | || ||| || || || |||||| |||||| | | ||||| || |||| Sbjct 1504087 TTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGT 1504028 Query 23802 ACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCA 23861 |||| |||||||| |||| || || ||||| ||||| | | || ||||| | || Sbjct 1504027 ACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGCATGAGCA 1503968 Query 23862 TGTATTGAGGTCTCTCGACCGTGACGC-CGTTAATTTTGAACAGATATGAACGTTGCATC 23920 ||| ||||||| || | || || | ||| || | ||| ||||| | | || | Sbjct 1503967 TGTGCTGAGGTCGTTC-AGCGACTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGC 1503909 Query 23921 GTTTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATTCAA 23979 || || || |||||||| | ||||| || || ||||| | || |||||||| ||||| Sbjct 1503908 GTCTTGAAACCAAAATATTGGTAGTTGAAATCTCGATCATAGACAATGGCCGAGTTCAA 1503850 >seq3 Length=4818847 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || || ||| | || || ||| |||| Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||||| | || |||||||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| || | || || | || | ||||| ||| Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || |||||||| || ||||| || || |||||| | || |||| Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGGTA 1796133 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| | || || || | | Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | ||||| | || ||||||||||||| | || || |||||| Sbjct 1796529 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 1796470 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || |||||||| || ||| | || || || ||||||| || ||| Sbjct 1796469 CAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGCGACTACAAC 1796410 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || ||||| ||||||||||| || || Sbjct 1796409 ATCCAGAAGGAATCTACTCTTCATCTCGTCCT 1796378 >seq1 Length=6490813 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||| || || ||||| || |||||| |||| || || ||||||||| || Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | ||||| | || ||||||||||||| | || |||||||||||||| || Sbjct 4921598 GACAACGTCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACTG 4921657 Query 31322 ATATTCGCTGGCAAACA 31338 || ||||| ||||| || Sbjct 4921658 ATCTTCGCCGGCAAGCA 4921674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766333135040