Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 187 3e-42 >seq5 Length=3814559 Score = 187 bits (206), Expect = 3e-42 Identities = 635/977 (65%), Gaps = 22/977 (2%) Strand=Plus/Minus Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002 |||| || || || || || ||||| ||||||| | ||| ||| | || ||| Sbjct 1504808 GCAAGGGAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTCA 1504749 Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062 ||||| || || | ||| || || || || | || || ||||| ||||| || Sbjct 1504748 GTGCACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1504689 Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122 |||||||| || || ||| |||| |||||||| || |||| | || | | ||| | | Sbjct 1504688 GCATCCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTAC 1504629 Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTC----CTTTCTCTTTCGTATAGAG 63177 || | | || | ||||| || | | || | | | |||| | |||||| Sbjct 1504628 CACA-GCTTCTGGGCCTTGAT----GGTCTGACGCCCGCGGCCTTCTTTCTCGTATTTCT 1504574 Query 63178 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGAC 63237 |||| ||||| ||||| || | || | | | | | || ||| | |||| Sbjct 1504573 CGTACAGGGCCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGAC 1504514 Query 63238 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63297 | | || | ||| ||| || | || || || ||||| || ||||| ||| |||| | Sbjct 1504513 AGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAGA 1504454 Query 63298 GAGCTATA-AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTT-AAGATC 63355 | || ||| || | || | || || || || || || ||||||| | ||| || Sbjct 1504453 GGGC-ATAGAACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTTC 1504395 Query 63356 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63415 || || | | | |||| ||||| || |||| || ||||| | | || || || Sbjct 1504394 AAG-AAGTCAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGACG 1504336 Query 63416 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63475 ||||| || ||||| || | || | ||| ||||| || | || | | ||| ||||| Sbjct 1504335 CTTGTTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAAT 1504276 Query 63476 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTA 63533 | |||||| || | ||||| ||||| ||||| ||| || ||||||| || | | Sbjct 1504275 GAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAATG 1504216 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTG 63593 ||||| | || || || || || | || ||||| | || || || | ||| Sbjct 1504215 GGCATTGA--GGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTG 1504158 Query 63594 TCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG 63653 || |||||||| || ||||| || || |||| | | | || || |||| ||| Sbjct 1504157 TCGTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGG 1504098 Query 63654 TGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAA 63713 | ||| ||||| ||||| || | || ||||| ||||| ||||| || || | ||| Sbjct 1504097 GGTTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGAC 1504038 Query 63714 AGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACA 63773 | || ||||||||||| || || || | ||| ||||| || || | ||| Sbjct 1504037 ATGAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACA 1503978 Query 63774 CGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGAT 63833 ||||| | |||||||||||||| |||| | | || ||| || |||| || ||| ||| Sbjct 1503977 CGCATGAGCATGTGCTGAGGTCGTTCAGCGACTTGCTTGCCAATCTTCAGCAGGTATGAT 1503918 Query 63834 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAA 63891 | |||| || || ||||||||||| | ||| ||||| ||||| || || | ||| Sbjct 1503917 CTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAA--TCTCGATCATAGACAATGG 1503860 Query 63892 CCGAATTGAGCTTATCC 63908 |||| || | || |||| Sbjct 1503859 CCGAGTTCAACTCATCC 1503843 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817505527360