Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 seq5 96.9 3e-15 >seq3 Length=4818847 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| ||||| || || || ||||| || ||||||| |||| || || ||||| Sbjct 1796387 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCCTCAAGCTGC 1796446 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || ||||| |||| ||||||||||| || || || |||||||| ||||| ||| || Sbjct 1796447 TTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 1796506 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | || ||| ||| ||| ||||||| || | |||||||| || Sbjct 1796507 GACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTA 1796566 Query 139742 AACGTTTTTACGAATATTTGCATA 139765 | || || ||||| || |||||| Sbjct 1796567 AGGGTCTTGACGAAGATCTGCATA 1796590 >seq5 Length=3814559 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/235 (69%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 52541 TTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACG 52600 |||||| |||| || | ||||| || | |||||||||| |||| ||||||| | Sbjct 1110858 TTGACACAATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCG---G 1110914 Query 52601 ACAAAG---CCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttt 52657 |||||| | | || ||| |||| ||||||||||| ||| || ||||| | || | Sbjct 1110915 ACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCT 1110974 Query 52658 tttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCA 52717 | |||||| || || | || || | | || | | ||| | |||||||| || | Sbjct 1110975 TCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGA 1111034 Query 52718 CGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772 |||| ||||||| | || || ||||| || || ||||| || || ||||| || Sbjct 1111035 CGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTG 1111089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063925590400