Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 1e-15
seq5 96.9 3e-15
>seq3
Length=4818847
Score = 98.7 bits (108), Expect = 1e-15
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621
|||| ||||| || || || ||||| || ||||||| |||| || || |||||
Sbjct 1796387 TGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCCTCAAGCTGC 1796446
Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681
|| ||||| |||| ||||||||||| || || || |||||||| ||||| ||| ||
Sbjct 1796447 TTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTG 1796506
Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741
|| | | || | || ||| ||| ||| ||||||| || | |||||||| ||
Sbjct 1796507 GACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTCTTGCCCGTA 1796566
Query 139742 AACGTTTTTACGAATATTTGCATA 139765
| || || ||||| || ||||||
Sbjct 1796567 AGGGTCTTGACGAAGATCTGCATA 1796590
>seq5
Length=3814559
Score = 96.9 bits (106), Expect = 3e-15
Identities = 163/235 (69%), Gaps = 6/235 (3%)
Strand=Plus/Plus
Query 52541 TTGACAATGTTCCGTGTGTGCGCAAAAAGGATGATTGGGCATTGAAATGGATCGAAAACG 52600
|||||| |||| || | ||||| || | |||||||||| |||| ||||||| |
Sbjct 1110858 TTGACACAATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCG---G 1110914
Query 52601 ACAAAG---CCACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttt 52657
|||||| | | || ||| |||| ||||||||||| ||| || ||||| | || |
Sbjct 1110915 ACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCT 1110974
Query 52658 tttCGGGTAGTTTTGCGGCAATATTTTACATCAAAACCTTGGGCATAATGCCCGGCCTCA 52717
| |||||| || || | || || | | || | | ||| | |||||||| || |
Sbjct 1110975 TCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGA 1111034
Query 52718 CGTTTAGCAACGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTG 52772
|||| ||||||| | || || ||||| || || ||||| || || ||||| ||
Sbjct 1111035 CGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTG 1111089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063925590400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |