Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5 167 3e-36
>seq5
Length=3814559
Score = 167 bits (184), Expect = 3e-36
Identities = 430/642 (67%), Gaps = 20/642 (3%)
Strand=Plus/Minus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATG 72080
|| || ||||| || ||||| ||| |||| || || ||| || | || | | ||
Sbjct 1504484 ACACGCTTCATGAAAAGATCCGGAGTCCAGAGGGC-ATAGAACAAGTCGCGTGCTCGGAC 1504426
Query 72081 CTCCTCGTTTCCTGTATTCTTTTT-AAGATCGAGGAACGCCATAATATCAGAATGCCACG 72139
||| || || || ||||||| | ||| || || || | | | |||| ||||| |
Sbjct 1504425 CTCTTCTTTGCCGTGATTCTTTCTCAAGTTCAAG-AAGTCAAAGACGTCAGCGTGCCATG 1504367
Query 72140 GTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAG 72199
| |||| || ||||| | | || || || ||||| || ||||| || | || | ||
Sbjct 1504366 GCTCCAGATAGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAG 1504307
Query 72200 CGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGG 72259
| ||||| || | || | | ||| ||||| | ||| ||||| | ||||| || || |
Sbjct 1504306 CAGTGTTGTTGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACCAG 1504247
Query 72260 AGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCAT 72317
|||| ||| || ||||||| || | || ||||| | || || || || || |
Sbjct 1504246 AGATGTAGGAACCGGTGGCACGGATGCAATGGGCATTGA--GGCCGATACCTCCGGCAGT 1504189
Query 72318 TTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCAT 72377
|| ||||| | || || || | || || ||||||||||| || || || ||| |
Sbjct 1504188 CTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTT 1504129
Query 72378 CATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGT 72437
||| | | | || || |||| ||| | || ||||| ||||| || | ||
Sbjct 1504128 CATATCGATCAAGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAGT 1504069
Query 72438 AGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTC 72497
||||| ||||| ||||| || || | ||||| || ||||||||||| || || ||
Sbjct 1504068 GGGAGAGGCGTGAGTAAAGCACTTCTGAGACATGAGGTTGTACGTCTCGATGGCCTTCTC 1504009
Query 72498 TATATC---CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTC 72554
| ||| || ||| || || |||| |||||||| | ||| |||||||||| |||
Sbjct 1504008 AACATCGTCCCCGTGA---ATACCAACCGACACACGCATGAGCATGTGCTGAGGTCGTTC 1503952
Query 72555 AACGATCTTG-TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAAT 72613
| ||| |||| || || |||| || ||| ||| | |||| || || ||||||||||
Sbjct 1503951 AGCGA-CTTGCTTGCCAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAAT 1503893
Query 72614 AGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATT 72653
| | ||| ||||| ||||| || || | ||| |||| ||
Sbjct 1503892 ATTGGTAGTTGAAA--TCTCGATCATAGACAATGGCCGAGTT 1503853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671139099329120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |