Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 1e-29
>seq5
Length=3814559
Score = 145 bits (160), Expect = 1e-29
Identities = 303/445 (68%), Gaps = 10/445 (2%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || ||||| || | ||| |||| |||| || |||||||| |||
Sbjct 1504321 CAGGGTGGCAACAAGCGTCCAGGTGCCTTTGCCATCTATCTGGAGCCATGGCACGCTGAC 1504380
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| |||||||| | | || | || || ||| ||||||| ||||| | |||
Sbjct 1504381 GTCTTTGACTTCTTGAACTTGAGAAAGAATCACGGCAAAGAAGAGGTCCGAGCACGCGAC 1504440
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AACGACGGTGGC 97052
||||| ||||| |||||| || ||| | ||||||||||| ||| || || |
Sbjct 1504441 TTGTTCTATGCCCTCTGGACTCCGGATCTTTTCATGAAGCGTGTCGAGAAGAACCAAG-- 1504498
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||||| || | || ||| || | || ||||| |||| || || || ||
Sbjct 1504499 -ACTGGACTCTGTTCTGTCCCCACGAAGCCCCGGGTCTCGCCGACGTCTACGGGGACGAA 1504557
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATGC 97171
|| |||||| |||| | |||||| |||| ||||| ||| |||| | || | ||
Sbjct 1504558 TTCGAGGCCCTGTACGAGAAATACGAGAAAGAAGGCCGCGGGCGTCAGACCA-TCAAGGC 1504616
Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230
| |||| |||||| | || || | ||| ||| |||||||| || || ||||| |
Sbjct 1504617 CC-AGAAGCTGTGGTACGCGGTCCTCGAGGCACAGACCGAGACTGGTACCCCATACATCC 1504675
Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||||| | || || |||||||| ||||||| || ||| |||
Sbjct 1504676 TCTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACTTGGGTACGATCCGAAGCT 1504735
Query 97291 CCAATCTGTGCACGGAAATTGTAGA 97315
|||| |||||||| ||||| || ||
Sbjct 1504736 CCAACCTGTGCACTGAAATCGTCGA 1504760
Score = 100 bits (110), Expect = 4e-16
Identities = 174/252 (69%), Gaps = 1/252 (0%)
Strand=Plus/Plus
Query 125322 AAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGG 125381
||||| || || || | || || ||||| | || | || || || || ||| | |||
Sbjct 1110837 AAACATAT-CTGTTCGATGCCATTGACACAATTCCCTGCATCCGCAAGAAAGCTGATTGG 1110895
Query 125382 GTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCC 125441
| || |||||||| ||| | |||| | |||| | ||||||| || |||||
Sbjct 1110896 GCAATGAAGTGGATCGCGGACAAAGAGTCGAGCTTCGCCCAACGACTGGTCGCGTTCGCT 1110955
Query 125442 GCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGC 125501
|| || || ||||||||||| |||||| || || ||||||| ||| | ||||
Sbjct 1110956 GCTGTCGAAGGCATCTTCTTCTCGGGTTCCTTCGCCTCCATCTTCTGGTTGAAGAGCAAG 1111015
Query 125502 GGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACAC 125561
|| ||||||||||| |||||| | |||||| | || ||||| || ||||| | ||
Sbjct 1111016 GGTCTCATGCCCGGTCTGACGTTCTCCAACGAGCTCATCTCTCGCGATGAGGGTATGCAT 1111075
Query 125562 TGTGACTTTGCC 125573
|||||||||
Sbjct 1111076 ACCGACTTTGCC 1111087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741059088841120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |