Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq5 187 3e-42
>seq5
Length=3814559
Score = 187 bits (206), Expect = 3e-42
Identities = 632/969 (65%), Gaps = 24/969 (2%)
Strand=Plus/Minus
Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950
||||| || || || || || ||||| ||||||| | ||| ||| | || ||
Sbjct 1504809 GGCAAGGGAGGCAAGGTTGCATACGGCGACCTCATCTGGGGCCGTGAATTCGACGATTTC 1504750
Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010
|||||| || || | ||| || || || || | || || ||||| ||||| ||
Sbjct 1504749 AGTGCACAGGTTGGAGCTTCGGATCGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCA 1504690
Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070
|||||||| || || ||| |||| |||||||| || |||| | || | | ||| |
Sbjct 1504689 AGCATCCTTGTAGAGGATGTATGGGGTACCAGTCTCGGTCTGTGCCTCGAGGACCGCGTA 1504630
Query 63071 CCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTC----CTTTCTCTTTCGTATAGT 63125
||| | | || | ||||| || | | || | | | |||| | ||||||
Sbjct 1504629 CCACA-GCTTCTGGGCCTTGAT----GGTCTGACGCCCGCGGCCTTCTTTCTCGTATTTC 1504575
Query 63126 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGA 63185
|||| ||||| ||||| || | || | | | | || || ||| | |||
Sbjct 1504574 TCGTACAGGGCCTCGAATTCGTCCCCGTAGACGTCGGCGAGACCCGGGGCTTCGTGGGGA 1504515
Query 63186 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63245
|| | || | ||| ||| || | || || || ||||| || ||||| ||| ||||
Sbjct 1504514 CAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTTCATGAAAAGATCCGGAGTCCAG 1504455
Query 63246 AGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTT-AAGAT 63303
|| || ||| || | || | | || || || || || ||||||| | ||| |
Sbjct 1504454 AGGGC-ATAGAACAAGTCGCGTGCTCGGACCTCTTCTTTGCCGTGATTCTTTCTCAAGTT 1504396
Query 63304 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 63363
| || || | | | |||| ||||| || |||| || ||||| | | || || |
Sbjct 1504395 CAAG-AAGTCAAAGACGTCAGCGTGCCATGGCTCCAGATAGATGGCAAAGGCACCTGGAC 1504337
Query 63364 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 63423
| ||||| || ||||| || | || | ||| ||||| || | || | | ||| ||||
Sbjct 1504336 GCTTGTTGCCACCCTGGTCAACATAGCGAGCAGTGTTGTTGAAGACGCGAAGCATGGGAA 1504277
Query 63424 TAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATT 63481
| | |||||| || | ||||| ||||| ||||| ||| || ||||||| || | |
Sbjct 1504276 TGAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGGAACCGGTGGCACGGATGCAAT 1504217
Query 63482 ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGT 63541
||||| | || || || || || | || ||||| | || || || | ||
Sbjct 1504216 GGGCATTGA--GGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGT 1504159
Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601
||| ||||| ||||| ||||| || || |||| | | | || || |||| ||
Sbjct 1504158 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTG 1504099
Query 63602 GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA 63661
| | || ||||| ||||| || | || ||||| ||||| ||||| || || | |||
Sbjct 1504098 GGGTTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGAGA 1504039
Query 63662 AAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGAC 63721
| || ||||||||||| || || || | ||| ||||| || || | ||
Sbjct 1504038 CATGAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACAC 1503979
Query 63722 ACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG-TTGTTTATTTTCAACAAGTAGG 63780
|||||| | |||||||||||||| |||| ||| |||| ||| || |||| || ||| |
Sbjct 1503978 ACGCATGAGCATGTGCTGAGGTCGTTCAGCGA-CTTGCTTGCCAATCTTCAGCAGGTATG 1503920
Query 63781 ATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAAT 63838
|| | |||| || || ||||||||||| | ||| ||||| ||||| || || | |||
Sbjct 1503919 ATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAA--TCTCGATCATAGACAAT 1503862
Query 63839 AACCGAGTT 63847
|||||||
Sbjct 1503861 GGCCGAGTT 1503853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622947106557920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |