Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 seq1 98.7 9e-16 seq5 89.7 4e-13 >seq3 Length=4818847 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || |||| || || | |||||| | |||||||| | Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || ||||| ||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || |||||||||||| || |||| ||||| || ||||| ||| Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || ||||| ||| | ||| | ||| | ||| || |||| || Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068 ||| | || ||||| | || ||| |||| || ||| ||| ||| |||||||| | ||| Sbjct 1796799 ACAGTCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACGTC 1796740 Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128 || |||||| ||||| |||||||| ||||| || || ||| | || || | || Sbjct 1796739 AAGTCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCA 1796680 Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 || || ||||||||||||| | | | | | ||||| || ||||| || || || || || Sbjct 1796679 GGTAAACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCAC 1796621 >seq1 Length=6490813 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| | |||||| ||||| | ||||| ||||| ||| Sbjct 4921565 ATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTCAAGTCCAAGATCCAGGAC 4921624 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || |||||||| |||||||| || ||| ||||||| | || |||||||||||| || ||| Sbjct 4921625 AAGGAAGGCATCCCTCCCGACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTTGAGGAT 4921684 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | | | | | ||||| || ||||| || || Sbjct 4921685 GGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716 >seq5 Length=3814559 Score = 89.7 bits (98), Expect = 4e-13 Identities = 178/261 (68%), Gaps = 2/261 (1%) Strand=Plus/Minus Query 133370 TTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTATAG 133429 || ||||| ||||| || | || || |||||||||||| ||||| || | ||| Sbjct 1504211 TTGAGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAG 1504152 Query 133430 ATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGGCATT 133489 ||||| | ||||||||| |||| || | || ||| | || ||||||| ||| || Sbjct 1504151 ATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGA 1504092 Query 133490 TTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAA-CAGCTTTGATCGCATCAA 133548 | | |||| | || | ||||||| ||||||||||| || | ||| ||| | Sbjct 1504091 GGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGA-GACATGAG 1504033 Query 133549 TCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACACGCAT 133608 |||| | ||| || || | |||| || || || ||||| | || |||||||| Sbjct 1504032 GTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGCAT 1503973 Query 133609 CAGCATATGTTGAGGTCGCTC 133629 ||||| || |||||||| || Sbjct 1503972 GAGCATGTGCTGAGGTCGTTC 1503952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935937121860