Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-21
seq1 98.7 9e-16
seq5 89.7 4e-13
>seq3
Length=4818847
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || |||| || || | |||||| | |||||||| |
Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| ||||| ||||| ||||| || || ||||| |||
Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| | ||||| | || |||||||||||| || |||| ||||| || ||||| |||
Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| || || ||||| ||| | ||| | ||| | ||| || |||| ||
Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135
Score = 98.7 bits (108), Expect = 9e-16
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 24009 ACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTC 24068
||| | || ||||| | || ||| |||| || ||| ||| ||| |||||||| | |||
Sbjct 1796799 ACAGTCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACGTC 1796740
Query 24069 AAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGC 24128
|| |||||| ||||| |||||||| ||||| || || ||| | || || | ||
Sbjct 1796739 AAGTCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCA 1796680
Query 24129 GGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
|| || ||||||||||||| | | | | | ||||| || ||||| || || || || ||
Sbjct 1796679 GGTAAACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCAC 1796621
>seq1
Length=6490813
Score = 98.7 bits (108), Expect = 9e-16
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| |||||| | |||||| ||||| | ||||| ||||| |||
Sbjct 4921565 ATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTCAAGTCCAAGATCCAGGAC 4921624
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| |||||||| |||||||| || ||| ||||||| | || |||||||||||| || |||
Sbjct 4921625 AAGGAAGGCATCCCTCCCGACCAGCAGCGACTGATCTTCGCCGGCAAGCAACTTGAGGAT 4921684
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | | | | | ||||| || ||||| || ||
Sbjct 4921685 GGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716
>seq5
Length=3814559
Score = 89.7 bits (98), Expect = 4e-13
Identities = 178/261 (68%), Gaps = 2/261 (1%)
Strand=Plus/Minus
Query 133370 TTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGAGTTTTATAG 133429
|| ||||| ||||| || | || || |||||||||||| ||||| || | |||
Sbjct 1504211 TTGAGGCCGATACCTCCGGCAGTCTTGGAGATCATGGCACAAATCTTGAGGGTGTCGTAG 1504152
Query 133430 ATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATAACACGACGACATCTGAGGCATT 133489
||||| | ||||||||| |||| || | || ||| | || ||||||| ||| ||
Sbjct 1504151 ATGCCCTCGATGCTGTCGTCCTTCATATCGATCAAGAAGCATGACGACAGCTGGGGTTGA 1504092
Query 133490 TTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGTAAA-CAGCTTTGATCGCATCAA 133548
| | |||| | || | ||||||| ||||||||||| || | ||| ||| |
Sbjct 1504091 GGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGTGAGTAAAGCACTTCTGA-GACATGAG 1504033
Query 133549 TCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCATGAATTTGTAGCGCTACACGCAT 133608
|||| | ||| || || | |||| || || || ||||| | || ||||||||
Sbjct 1504032 GTTGTACGTCTCGATGGCCTTCTCAACATCGTCCCCGTGAATACCAACCGACACACGCAT 1503973
Query 133609 CAGCATATGTTGAGGTCGCTC 133629
||||| || |||||||| ||
Sbjct 1503972 GAGCATGTGCTGAGGTCGTTC 1503952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935937121860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |