Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3 105 6e-18 >seq3 Length=4818847 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || |||| || | ||||| || ||||| Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| ||||| ||||| || |||| Sbjct 1796301 GACACCATCGA--CAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACC 1796244 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || |||||||| ||| | || |||| | || | ||||||| Sbjct 1796243 AACAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACA 1796184 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || || || ||||| || || ||| | ||||| || || |||| || Sbjct 1796183 ACATCCAGAAGGAATCGACACTCCATCTTGTGCTCAGACTGCGAGGTGG 1796135 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || || | || || | || ||||| || ||| Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| || || ||||| ||||||||| Sbjct 1796073 GACACTATCGACAACGTCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCAA 1796014 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| || | ||||||| || ||| | |||||||| Sbjct 1796013 CAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAAC 1795954 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || || || ||| || || || || Sbjct 1795953 ATCCAGAAGGAGAGCACTCTTCACTTGGT 1795925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327936625780