Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 120 6e-22 seq1 84.2 4e-11 >seq4 Length=4578819 Score = 120 bits (132), Expect = 6e-22 Identities = 109/135 (81%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| ||||| |||||| ||||| | ||| ||| || || Sbjct 3764820 CACTCCCGCATGCGCGGTCTGTCTGGTGGCCAGCGTGTCAAGGTCGTCCTCGCTGCCTGC 3764879 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 | |||||||| |||||||||||||||||| |||||||||||||||||||| ||||| || Sbjct 3764880 AC-GTGGCAACGCCCTCACGTGATCGTTCTGGACGAGCCTACCAACTATCTCGACCGAGA 3764938 Query 280823 GAGCCTGGGCGCTCT 280837 ||| || ||||| Sbjct 3764939 CTCCCTTGGTGCTCT 3764953 Score = 93.3 bits (102), Expect = 9e-14 Identities = 177/257 (69%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 280138 TCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTA 280197 ||| || ||||| ||| || || || |||| |||||||| ||||||||||| || | Sbjct 3764209 TCACCTTCCAGGTCTCTCTGGGATCGCGTATTGCCGTCATTGGGCCCAATGGTGCCGGCA 3764268 Query 280198 AGTCTACCCTAATCAAAGTCCTGACTGGCGA---GACCCAGGCCACTGAGGGGTCCGTTT 280254 |||| || || |||| || || ||||| || || || |||||| || |||| Sbjct 3764269 AGTCGACTCTTGTCAACGTTCTCACTGGTGAACTGATCC---CCACTGTTGGTGAGGTTT 3764325 Query 280255 GGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGA 280314 |||| ||||| || || || ||| || |||||||||||| || || || | Sbjct 3764326 ACCAGCACGAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCACATATTGATA 3764385 Query 280315 ACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGAT 280373 ||||||| |||| ||| || ||||||| || ||||| | | || | || ||||| Sbjct 3764386 ACCACCTCGACAAGACCCCCTCGGAATACATCCAATGGCG-TTTCCAGACCGGTGAGGAT 3764444 Query 280374 CTGGAGTCGGTGGATCG 280390 | ||| | ||||||| Sbjct 3764445 CGTGAGACCATGGATCG 3764461 >seq1 Length=6490813 Score = 84.2 bits (92), Expect = 4e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 |||| || |||| ||||| || ||||| || || ||||| || |||| || || ||| Sbjct 3570542 TCATCGGCGCCAACGGTGCCGGAAAGTCCACGCTGATCAAGCTCTTGACCGGTGAAACC- 3570600 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | || | || ||| | | | ||||||||||||| |||| || | ||| || || Sbjct 3570601 ATTCCTCAGACGGGCAAGGTCGAGAAGCATCCCAACTTGCGAATTGGATACATCAAGCAA 3570660 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 ||||| || | ||| | |||| || || || | |||||| ||||| ||| | || ||| Sbjct 3570661 CACGCGCTCGAACACGTGGAGATGCATCTCGAAAAGACTCCCAACCAGTACCTGCAATGG 3570720 Query 280353 CGCTATGC 280360 || ||||| Sbjct 3570721 CGATATGC 3570728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836641970092