Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 120 6e-22
seq1 84.2 4e-11
>seq4
Length=4578819
Score = 120 bits (132), Expect = 6e-22
Identities = 109/135 (81%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| |||||||| ||||| |||||| ||||| | ||| ||| || ||
Sbjct 3764820 CACTCCCGCATGCGCGGTCTGTCTGGTGGCCAGCGTGTCAAGGTCGTCCTCGCTGCCTGC 3764879
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
| |||||||| |||||||||||||||||| |||||||||||||||||||| ||||| ||
Sbjct 3764880 AC-GTGGCAACGCCCTCACGTGATCGTTCTGGACGAGCCTACCAACTATCTCGACCGAGA 3764938
Query 280823 GAGCCTGGGCGCTCT 280837
||| || |||||
Sbjct 3764939 CTCCCTTGGTGCTCT 3764953
Score = 93.3 bits (102), Expect = 9e-14
Identities = 177/257 (69%), Gaps = 8/257 (3%)
Strand=Plus/Plus
Query 280138 TCAACTCGCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTA 280197
||| || ||||| ||| || || || |||| |||||||| ||||||||||| || |
Sbjct 3764209 TCACCTTCCAGGTCTCTCTGGGATCGCGTATTGCCGTCATTGGGCCCAATGGTGCCGGCA 3764268
Query 280198 AGTCTACCCTAATCAAAGTCCTGACTGGCGA---GACCCAGGCCACTGAGGGGTCCGTTT 280254
|||| || || |||| || || ||||| || || || |||||| || ||||
Sbjct 3764269 AGTCGACTCTTGTCAACGTTCTCACTGGTGAACTGATCC---CCACTGTTGGTGAGGTTT 3764325
Query 280255 GGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGA 280314
|||| ||||| || || || ||| || |||||||||||| || || || |
Sbjct 3764326 ACCAGCACGAGAACATCCGTATCGCCTACATCAAGCAGCACGCTTTCGCACATATTGATA 3764385
Query 280315 ACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGCTATGCA-AGTGGGCAGGAT 280373
||||||| |||| ||| || ||||||| || ||||| | | || | || |||||
Sbjct 3764386 ACCACCTCGACAAGACCCCCTCGGAATACATCCAATGGCG-TTTCCAGACCGGTGAGGAT 3764444
Query 280374 CTGGAGTCGGTGGATCG 280390
| ||| | |||||||
Sbjct 3764445 CGTGAGACCATGGATCG 3764461
>seq1
Length=6490813
Score = 84.2 bits (92), Expect = 4e-11
Identities = 133/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
|||| || |||| ||||| || ||||| || || ||||| || |||| || || |||
Sbjct 3570542 TCATCGGCGCCAACGGTGCCGGAAAGTCCACGCTGATCAAGCTCTTGACCGGTGAAACC- 3570600
Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
| || | || ||| | | | ||||||||||||| |||| || | ||| || ||
Sbjct 3570601 ATTCCTCAGACGGGCAAGGTCGAGAAGCATCCCAACTTGCGAATTGGATACATCAAGCAA 3570660
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
||||| || | ||| | |||| || || || | |||||| ||||| ||| | || |||
Sbjct 3570661 CACGCGCTCGAACACGTGGAGATGCATCTCGAAAAGACTCCCAACCAGTACCTGCAATGG 3570720
Query 280353 CGCTATGC 280360
|| |||||
Sbjct 3570721 CGATATGC 3570728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836641970092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |