Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq3 192 1e-43
seq1 138 2e-27
seq6 123 5e-23
>seq3
Length=4818847
Score = 192 bits (212), Expect = 1e-43
Identities = 168/208 (81%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || || || || || |||||||| ||||| |||||||| || ||||| || |
Sbjct 1796154 CAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTGCCATCCTCAA 1796213
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||| |||||||| || || | ||||||||||| ||||| |||||||||||||| |
Sbjct 1796214 GTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTGTCTTGGA 1796273
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| | |||||| ||||||||||||| ||||| ||||||| ||| ||||| || |
Sbjct 1796274 TCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTAATGGTCTTGC 1796333
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||||||||| ||||||||
Sbjct 1796334 CGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| ||||| |||||||| || ||| ||| || |||||||| ||||| |||
Sbjct 1795907 CCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1795966
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| || || || || | || |||||||| || |||
Sbjct 1795967 AGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 1796026
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| ||||| | ||||||| ||||| ||||| | ||||| ||
Sbjct 1796027 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACC 1796086
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||| || || || || ||||| ||||||||||| || |||||
Sbjct 1796087 TCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 147 bits (162), Expect = 4e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | || || || || || || |||||||| || |||
Sbjct 1796363 CCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1796422
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | ||||| || | |||||| || ||||| || || | ||| ||||| || |||
Sbjct 1796423 AAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGA 1796482
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| || ||||| | ||||||| |||||||| || ||| || || ||
Sbjct 1796483 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATC-GCTGGACTCGAC 1796541
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || ||||| |||||||||||||| ||||||||
Sbjct 1796542 CTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 143 bits (158), Expect = 5e-29
Identities = 157/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || |||||||| || |||||||| || |||
Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | || || || ||||| || || | || ||||| || |||
Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|||||||||||||| |||||||| | ||||||| |||||||| || ||| || || ||
Sbjct 1796711 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATC-GCTGGACTCAAC 1796769
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| ||||||||||
Sbjct 1796770 CTCGAGGGTGATGGTCTTTCCCGTGA 1796795
>seq1
Length=6490813
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | ||||| |||||||| ||
Sbjct 4921716 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 4921657
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|||| || |||||||| || |||||||||||||| || ||||| | ||||||| |||
Sbjct 4921656 AGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 4921597
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| | || || || || | ||||||||| || |||||||||||||| |||||
Sbjct 4921596 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 4921538
Score = 87.8 bits (96), Expect = 3e-12
Identities = 247/378 (65%), Gaps = 1/378 (0%)
Strand=Plus/Plus
Query 176029 GGCGCTTCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATC 176088
||||||| | |||||| |||||||| | || ||||| |||||| | ||| | |
Sbjct 2518567 GGCGCTTGAGATTGTCCACGATATCTTCAGGATTGTAGTTGGGAATGGAGGAGCTCCAAC 2518626
Query 176089 CTGTTCCTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATT 176148
| || || || || | ||||| || |||| | ||||| |||||||||| |
Sbjct 2518627 CAGTACCAATACCATCGGCACCATTGACGAGGACCATCGGGACAACGGGAACATAGACCT 2518686
Query 176149 CCGGTTCAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGT 176208
| ||||| ||| | | ||||||| | || |||| || ||||||| || ||
Sbjct 2518687 CTGGTTCGATCTTCTTGTCGTCATCAGTGTTATATGTCAGAAGTGGCTCGTCAGCGGGGT 2518746
Query 176209 GGAAAATATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGT 176268
|||| | | || | || || || | ||||| || || | ||| ||| |
Sbjct 2518747 GGAAGAGTTTTCGTGCAAATGGCGATAGACGGGTGAAAATGTAACGAGCGCTGGCAGAAT 2518806
Query 176269 CCTTGCCTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTAT 176328
| ||||||| ||| || | ||| ||||| || || | |||||||||||| |
Sbjct 2518807 CGCTGCCTCCCTGATTTCGCGTACCAAATTGGCCAGACGGTTCTAACAAATTGATGTTGT 2518866
Query 176329 TCGAACCCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGT 176388
|||| ||||| || ||||||| || || |||| |||||| || | ||| ||||
Sbjct 2518867 TCGATCCCACAAAGGTCTGGGCCAGGCCAACAATGGTTTGCTGGAGGGATGTCTCTCCGT 2518926
Query 176389 GGTGATA-GCCGGCGTTC 176405
|||| || |||| | |||
Sbjct 2518927 GGTGGTAGGCCGTCATTC 2518944
>seq6
Length=3558010
Score = 123 bits (136), Expect = 5e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
||| || |||||||||| |||||||| || || ||||| ||||||||||| || |||||
Sbjct 445081 TCCACCACGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGA 445140
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
|| || | || ||||| | ||||| |||||||| || || | ||| |||||||| ||
Sbjct 445141 CAGGGTGCGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGG 445200
Query 68354 AATGCCTTCCTTGTCT 68369
||| ||||||||||||
Sbjct 445201 AATTCCTTCCTTGTCT 445216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622261756640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |