Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 3e-26
seq1 98.7 2e-15
>seq3
Length=4818847
Score = 134 bits (148), Expect = 3e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || |||||||||| || ||| || ||||| || ||||||
Sbjct 1796363 CCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTC 1796422
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || | || ||||| |||||||| ||||| || || | ||
Sbjct 1796423 AAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGA 1796482
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || |||||||| || | || ||||| || || | |||||| || || ||
Sbjct 1796483 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACC 1796542
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || || || ||||||||||| ||||||||
Sbjct 1796543 TCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
Score = 123 bits (136), Expect = 6e-23
Identities = 166/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| || || ||||| | || ||| || ||||| || || || | |
Sbjct 1796135 CCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAG 1796194
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | || || || | ||| || || ||||||||||| |||||||| || |||
Sbjct 1796195 AGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTG---GTCGGGG 1796251
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|||||||| || || ||||| || | || || || || || | || ||||||
Sbjct 1796252 GGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCG 1796311
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || || || ||||| ||||| || ||||||||||| ||||||||
Sbjct 1796312 ACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 113 bits (124), Expect = 1e-19
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || |||| | || | |||| ||||| || || ||||| || || ||
Sbjct 1795904 TGACCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCA 1795963
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| ||| || || || ||||| | || || || || ||||||| |||||||| |
Sbjct 1795964 GAGAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGG 1796023
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || || || ||||| |||| || ||||| || |||| || |||||
Sbjct 1796024 GGAATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCC 1796083
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || |||||||| || || |||||||||||||| || |||||
Sbjct 1796084 ACCTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || | || | ||| || || ||||| || ||||||
Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | |||||| ||||||||||| || ||||| || | ||
Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || ||||| || |||| || ||||| || || | |||||| || || ||
Sbjct 1796711 ATGCCTTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACC 1796770
Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449
||||| ||||| ||||| || ||
Sbjct 1796771 TCGAGGGTGATGGTCTTTCCCGT 1796793
>seq1
Length=6490813
Score = 98.7 bits (108), Expect = 2e-15
Identities = 210/303 (69%), Gaps = 8/303 (3%)
Strand=Plus/Plus
Query 326078 TCGGTCATGATCATCACATGACCGTAACG-AAGCGAGGACGTGTCTTTGTACACTTTACC 326136
|| ||||||||||||| ||| ||||| || || | | || ||||| |||| || ||
Sbjct 2519562 TCCGTCATGATCATCAAATGTCCGTATCGCAAACCATGA-GTGTCGGTGTAGACCTTCTT 2519620
Query 326137 GGTTTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG 326195
| || ||||| |||| | ||||| ||| |||||| ||||||||| || || |
Sbjct 2519621 GTGCTGCAGGCCCAGAAAATTTTTGATATTCTG-GATTTCAGCGTTCTTCGAAAT-CTGG 2519678
Query 326196 -CCACGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTC 326254
| | ||| |||||||| || |||| || ||||| || || |||||||| ||| |
Sbjct 2519679 TCGATGGAGGCATCGCGCACATTCAGGAGCTTTCCTCGTAGCGGGAACACACCAAACAAG 2519738
Query 326255 TCGCGACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGT 326313
|| |||| || || ||| | ||||| | ||| || | | | || ||||| || || ||
Sbjct 2519739 TCCGGACCCACAACAGACCGACCTGCAAGTGCCAG-GCCTTTGGCTGAATCACCTTCAGT 2519797
Query 326314 CAGAATGAGAGTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTT 326373
|| || | ||||||| | | || | || || || || | |||||| |||||||
Sbjct 2519798 CAAGATCAAAGTGCACTTGTGGCCTTCTTTGGTGCCTGCTTTGTTGGCATCGGTGAGTTT 2519857
Query 326374 GGG 326376
|||
Sbjct 2519858 GGG 2519860
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || || || || || || | ||| || || |||||||||
Sbjct 4921716 TTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGATC 4921657
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || ||||| ||||| || |||||||| || | || ||||| ||
Sbjct 4921656 AGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGTCG 4921597
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | ||| ||| || || ||||| ||||| ||||| || || || ||||| |||||
Sbjct 4921596 ATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAA 4921538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179654218628136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |