Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3 122 9e-23
seq1 104 3e-17
>seq3
Length=4818847
Score = 122 bits (134), Expect = 9e-23
Identities = 158/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
||||| ||||| || | ||||||||||| || || |||||||||| ||||| || |
Sbjct 1795919 CGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCA 1795978
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| ||||| || || | |||||| ||||| | || | || |||||||
Sbjct 1795979 TCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTG 1796038
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|| ||| || |||| ||| | | | ||||| |||||||| || | || ||
Sbjct 1796039 TCTTGGATCTTCGACTTGA-CGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAAT 1796097
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| ||||| || || ||||| || |||||||||||
Sbjct 1796098 CGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 84.2 bits (92), Expect = 2e-11
Identities = 134/187 (72%), Gaps = 4/187 (2%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| |||| ||| |||||| || || ||||| || ||| || || | || ||
Sbjct 1796609 ACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCG 1796668
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|| || ||||| ||||| || || ||||||||||| | || | || ||||||||| ||
Sbjct 1796669 AGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC-TG 1796727
Query 42120 ATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177
| | || | |||| ||| | | | || ||||| || || || |||| |||||||| |
Sbjct 1796728 AATCTTCGACTTGA-CGTTGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCT 1796786
Query 42178 TGCCCGT 42184
| |||||
Sbjct 1796787 TTCCCGT 1796793
>seq1
Length=6490813
Score = 104 bits (114), Expect = 3e-17
Identities = 143/196 (73%), Gaps = 3/196 (2%)
Strand=Plus/Minus
Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078
|||| || || ||||| || ||| || || | || || || ||||| || ||||| |
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138
| |||||||||||||||| || | || ||||||||| ||| || |||| ||| |
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 4921600
Query 42139 -CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197
| | ||||||| ||| || || |||| |||||||| |||||||| || ||||| ||
Sbjct 4921599 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 4921540
Query 42198 AAGATTTGCATTTTCA 42213
||| | | |||||||
Sbjct 4921539 AAGCTGT-AATTTTCA 4921525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212718518080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |