Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 seq6 100 3e-16 >seq3 Length=4818847 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| ||| ||||| ||||| | |||||||| || || ||||||||||| | Sbjct 1796134 ACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGA 1796193 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || | | || ||||| ||||||||||| | || || ||||| |||||||| || Sbjct 1796194 GAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGG 1796253 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||||||||| || ||||| || || ||| ||| || | || || | || || Sbjct 1796254 AATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGAC 1796313 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | |||||||||||| | || || ||||| || ||||| Sbjct 1796314 TTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || ||||| || || |||||||| || | |||||| | || Sbjct 1796378 AGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCC 1796437 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || || | || || || |||||||| || ||||| ||||| || || Sbjct 1796438 TCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 1796497 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | ||||| | || || || || | ||| | |||| Sbjct 1796498 TGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 1796557 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 1796558 TTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || ||||||||||| | || || || | ||||| ||||||||||| ||| | Sbjct 1795943 TCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 1796002 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || | ||||| ||||| || ||||| || || || ||||| || || ||| || Sbjct 1796003 ATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTG 1796062 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || ||| | ||||| || | || | |||||||| || | ||| || ||| Sbjct 1796063 TCGATAGTGTCAGAAGATTCCACCTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACG 1796122 Query 64433 AAAATTTGCAT 64443 || |||||||| Sbjct 1796123 AAGATTTGCAT 1796133 >seq6 Length=3558010 Score = 100 bits (110), Expect = 3e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || ||||| |||||||| || | | |||||| ||||||| || ||||||||| Sbjct 445112 GTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCTTCGAGTTGCTTGCCG 445171 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || | || || || ||||||||||||||||||||||| || ||| Sbjct 445172 GCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTGTCT 445216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644725053280