Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq5 192 6e-44 seq3 96.9 3e-15 seq1 93.3 4e-14 seq6 84.2 2e-11 >seq5 Length=3814559 Score = 192 bits (212), Expect = 6e-44 Identities = 489/741 (66%), Gaps = 5/741 (1%) Strand=Plus/Minus Query 153809 GCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGC 153868 |||||| || |||||||| ||||||||| ||| || ||||| |||||| |||||| Sbjct 1504596 GCGGCCTTCTTTCTCGTATTTCTCGTACAGGGCCTCGAATTCGTCCCCGTAGACGTCGGC 1504537 Query 153869 GAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCG 153928 ||| || || | || ||||| | ||| | ||| | || | ||| || Sbjct 1504536 GAGACCCGGGGCTTCGTGGGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTT 1504477 Query 153929 CATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGC 153988 |||||| |||||||| |||||| || || | | |||||| || | || || Sbjct 1504476 CATGAAAAGATCCGGAGTCCAGAGGGCATAGAACAAGTCGCGTGCTCGGACCTCTTCTTT 1504417 Query 153989 GCCCATGTTGCGTT-TCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGT 154047 ||| || | | || ||| || | | | | ||| ||| |||||||| || || | | Sbjct 1504416 GCCG-TGATTCTTTCTCAAGTTCAAGAAGTCAAAGACGTCAGCGTGCCATGGCTCCAGAT 1504358 Query 154048 AGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGT 154104 ||| ||| | ||||||| |||||| || ||||| || || | ||| | | |||| Sbjct 1504357 AGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAGCAGTGTTGT 1504298 Query 154105 TGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGC 154164 |||||||||| | |||||| || ||| | | |||||| || || | ||| | | Sbjct 1504297 TGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGG 1504238 Query 154165 TGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGG 154224 ||| ||| || | ||| | || | ||| || || ||| | ||| || || Sbjct 1504237 AACCGGTGGCACGGATGCAATGGGCATTGAGGCCGATACCTCCGGCAGTCTTGGAGATCA 1504178 Query 154225 CAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCA 154284 || || || || ||||||||| |||||||| ||||| | ||| || Sbjct 1504177 TGGCACAAATCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCA 1504118 Query 154285 AGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGT 154344 |||| || || ||| || || ||||||| || ||||| |||||| |||| Sbjct 1504117 AGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGT 1504058 Query 154345 GCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGC 154404 | ||||| || || ||| | | |||||| |||||||| | || | ||| || | Sbjct 1504057 GAGTAAAGCACTTCTGAGACATGAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCC 1503998 Query 154405 CGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGT 154464 ||||||| || | || || ||||||||||||||||| || ||||| |||||| ||| Sbjct 1503997 CGTGAATACCAACCGACACACGCATGAGCATGTGCTGAGGTCGTTCAGCGACTTGCTTGC 1503938 Query 154465 CAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAAT 154524 ||||||||| || ||| | || || || ||| |||| ||||| | ||| | |||| Sbjct 1503937 CAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAAT 1503878 Query 154525 CTAGCTCATGAGCGATGGCCG 154545 || | |||| | ||||||| Sbjct 1503877 CTCGATCATAGACAATGGCCG 1503857 Score = 102 bits (112), Expect = 8e-17 Identities = 268/402 (67%), Gaps = 9/402 (2%) Strand=Plus/Plus Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACG 52388 || ||| | ||||| || ||| | ||||||||||||||||||| | | | | | | | Sbjct 1110869 CCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCG-GACAAAGAGTCGAG 1110927 Query 52389 C-TGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447 | | ||| | || |||| || ||||| ||||| ||| | || || || || ||| Sbjct 1110928 CTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTCCTT 1110987 Query 52448 TGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGA 52507 ||| ||||||| | | || | || || | |||||||| ||||||||| |||||| Sbjct 1110988 CGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAACGA 1111047 Query 52508 GTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCC-TCTACTACAAGACGC 52566 | | || || ||||| || || |||| || |||||||| |||| ||| | ||| | Sbjct 1111048 GCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTGCCTTCTCATGCAA----C 1111103 Query 52567 GCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625 ||| | || ||| || | | | | || ||| ||| | ||| || | Sbjct 1111104 ATCTGAAGCACAAGCCGGACCCGAAGCTCATTGAAGA-CATCGTCACCGCGGCTGTCGTG 1111162 Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685 ||||| |||||||| | || | || ||||| | ||||| ||||||||||| || Sbjct 1111163 ATCGAGAAGGAGTTCCTGACCGATGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAAG 1111222 Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTG 52727 ||| ||||||||||||| || || || || ||| || Sbjct 1111223 CTTATGCAACAGTACATCGAGTTCGTCGCTGACCGCCTGCTG 1111264 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| ||||| ||||| || |||||||| || | | | || | || ||| | | Sbjct 1505377 GGTTGACGACTTGGAACTCACCAGCCAACACACGACGCGAGTAGATGTTCGAGGTGTATG 1505318 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || || ||||||| ||||| | || || | |||| ||| || |||||| || | Sbjct 1505317 GCTCGAAACATTCGTTGTTGCCCAAGATCTGCGAAGTGGATGCAGTTGGCATGGGTGCAA 1505258 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 | | | ||| || || | ||||| ||| ||| ||||||||| | |||||||| Sbjct 1505257 CGAGGAGAGAGTTGCGAACACCGTGTTTGGCAATCTCGGCCTTCAACGAATCCCAATCCC 1505198 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG 153244 |||| | || || | ||||||||||||||||| Sbjct 1505197 ACAGGTCACTGGGAGTGACATTCCACATGTCGTACTG 1505161 >seq3 Length=4818847 Score = 96.9 bits (106), Expect = 3e-15 Identities = 135/186 (73%), Gaps = 4/186 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | |||||||| || ||||||||||||||| Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || |||||||||||||| | |||| || ||||| ||||| ||||| Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| | || | || | ||| || | ||| ||| | ||||| | Sbjct 1796711 ATGCCTTCCTTGTC-CTGAATCTTCGACTTGACGTTG-TCGATGGTATCGCTGGACTCAA 1796768 Query 138566 CCTCGA 138571 |||||| Sbjct 1796769 CCTCGA 1796774 >seq1 Length=6490813 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| ||||| ||||| ||||| || |||| ||| Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | || ||||| ||||| ||||| || ||||| ||||| ||| || || | | | Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||||| |||||| ||||||| || | || || || || || || || || | Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539 Query 138605 A 138605 | Sbjct 4921538 A 4921538 >seq6 Length=3558010 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 |||| || || || | | | ||||||||||| |||||||||||| || || || | Sbjct 445094 CGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCG 445153 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || |||||||| || |||| |||| || || || ||||| ||||| || ||||| ||| Sbjct 445154 TCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTG 445213 Query 138520 TCGGTG 138525 || ||| Sbjct 445214 TCTGTG 445219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262325560640