Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq5 192 6e-44
seq3 96.9 3e-15
seq1 93.3 4e-14
seq6 84.2 2e-11
>seq5
Length=3814559
Score = 192 bits (212), Expect = 6e-44
Identities = 489/741 (66%), Gaps = 5/741 (1%)
Strand=Plus/Minus
Query 153809 GCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGC 153868
|||||| || |||||||| ||||||||| ||| || ||||| |||||| ||||||
Sbjct 1504596 GCGGCCTTCTTTCTCGTATTTCTCGTACAGGGCCTCGAATTCGTCCCCGTAGACGTCGGC 1504537
Query 153869 GAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCG 153928
||| || || | || ||||| | ||| | ||| | || | ||| ||
Sbjct 1504536 GAGACCCGGGGCTTCGTGGGGACAGAACAGAGTCCAGTCTTGGTTCTTCTCGACACGCTT 1504477
Query 153929 CATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGC 153988
|||||| |||||||| |||||| || || | | |||||| || | || ||
Sbjct 1504476 CATGAAAAGATCCGGAGTCCAGAGGGCATAGAACAAGTCGCGTGCTCGGACCTCTTCTTT 1504417
Query 153989 GCCCATGTTGCGTT-TCAGATTGAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGT 154047
||| || | | || ||| || | | | | ||| ||| |||||||| || || | |
Sbjct 1504416 GCCG-TGATTCTTTCTCAAGTTCAAGAAGTCAAAGACGTCAGCGTGCCATGGCTCCAGAT 1504358
Query 154048 AGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGCACCATATTGT 154104
||| ||| | ||||||| |||||| || ||||| || || | ||| | | ||||
Sbjct 1504357 AGATGGCAAAGGCACCTGGACGCTTGTTGCCACCCTGGTCAACATAGCGAGCAGTGTTGT 1504298
Query 154105 TGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGC 154164
|||||||||| | |||||| || ||| | | |||||| || || | ||| | |
Sbjct 1504297 TGAAGACGCGAAGCATGGGAATGAGACCGTTGGAGGTGCCATTAGTACCAGAGATGTAGG 1504238
Query 154165 TGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGG 154224
||| ||| || | ||| | || | ||| || || ||| | ||| || ||
Sbjct 1504237 AACCGGTGGCACGGATGCAATGGGCATTGAGGCCGATACCTCCGGCAGTCTTGGAGATCA 1504178
Query 154225 CAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCA 154284
|| || || || ||||||||| |||||||| ||||| | ||| ||
Sbjct 1504177 TGGCACAAATCTTGAGGGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATATCGATCA 1504118
Query 154285 AGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGT 154344
|||| || || ||| || || ||||||| || ||||| |||||| ||||
Sbjct 1504117 AGAAGCATGACGACAGCTGGGGTTGAGGCGTTCCAGCATTGAAGAGAGTGGGAGAGGCGT 1504058
Query 154345 GCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGC 154404
| ||||| || || ||| | | |||||| |||||||| | || | ||| || |
Sbjct 1504057 GAGTAAAGCACTTCTGAGACATGAGGTTGTACGTCTCGATGGCCTTCTCAACATCGTCCC 1503998
Query 154405 CGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACTCTATTGT 154464
||||||| || | || || ||||||||||||||||| || ||||| |||||| |||
Sbjct 1503997 CGTGAATACCAACCGACACACGCATGAGCATGTGCTGAGGTCGTTCAGCGACTTGCTTGC 1503938
Query 154465 CAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAAT 154524
||||||||| || ||| | || || || ||| |||| ||||| | ||| | ||||
Sbjct 1503937 CAATCTTCAGCAGGTATGATCTCTCCAGCGTCTTGAAACCAAAATATTGGTAGTTGAAAT 1503878
Query 154525 CTAGCTCATGAGCGATGGCCG 154545
|| | |||| | |||||||
Sbjct 1503877 CTCGATCATAGACAATGGCCG 1503857
Score = 102 bits (112), Expect = 8e-17
Identities = 268/402 (67%), Gaps = 9/402 (2%)
Strand=Plus/Plus
Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACG 52388
|| ||| | ||||| || ||| | ||||||||||||||||||| | | | | | | |
Sbjct 1110869 CCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCG-GACAAAGAGTCGAG 1110927
Query 52389 C-TGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447
| | ||| | || |||| || ||||| ||||| ||| | || || || || |||
Sbjct 1110928 CTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTCCTT 1110987
Query 52448 TGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGA 52507
||| ||||||| | | || | || || | |||||||| ||||||||| ||||||
Sbjct 1110988 CGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAACGA 1111047
Query 52508 GTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCC-TCTACTACAAGACGC 52566
| | || || ||||| || || |||| || |||||||| |||| ||| | ||| |
Sbjct 1111048 GCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTGCCTTCTCATGCAA----C 1111103
Query 52567 GCGTGACCGAAAAATTGGATTCGGA-CACGATCCTGAGCATGTTCAAGGAGGCGGTGGCT 52625
||| | || ||| || | | | | || ||| ||| | ||| || |
Sbjct 1111104 ATCTGAAGCACAAGCCGGACCCGAAGCTCATTGAAGA-CATCGTCACCGCGGCTGTCGTG 1111162
Query 52626 ATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAG 52685
||||| |||||||| | || | || ||||| | ||||| ||||||||||| ||
Sbjct 1111163 ATCGAGAAGGAGTTCCTGACCGATGCTCTGCCTTGTGCCCTGCTCGGCATGAACGCCAAG 1111222
Query 52686 TCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTG 52727
||| ||||||||||||| || || || || ||| ||
Sbjct 1111223 CTTATGCAACAGTACATCGAGTTCGTCGCTGACCGCCTGCTG 1111264
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| ||||| ||||| || |||||||| || | | | || | || ||| | |
Sbjct 1505377 GGTTGACGACTTGGAACTCACCAGCCAACACACGACGCGAGTAGATGTTCGAGGTGTATG 1505318
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || || ||||||| ||||| | || || | |||| ||| || |||||| || |
Sbjct 1505317 GCTCGAAACATTCGTTGTTGCCCAAGATCTGCGAAGTGGATGCAGTTGGCATGGGTGCAA 1505258
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
| | | ||| || || | ||||| ||| ||| ||||||||| | ||||||||
Sbjct 1505257 CGAGGAGAGAGTTGCGAACACCGTGTTTGGCAATCTCGGCCTTCAACGAATCCCAATCCC 1505198
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTG 153244
|||| | || || | |||||||||||||||||
Sbjct 1505197 ACAGGTCACTGGGAGTGACATTCCACATGTCGTACTG 1505161
>seq3
Length=4818847
Score = 96.9 bits (106), Expect = 3e-15
Identities = 135/186 (73%), Gaps = 4/186 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | || || || | | | |||||||| || |||||||||||||||
Sbjct 1796591 CCACCACGGAGACGGAGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1796650
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || |||||||||||||| | |||| || ||||| ||||| |||||
Sbjct 1796651 AGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1796710
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| ||||| ||||| ||| | || | || | ||| || | ||| ||| | ||||| |
Sbjct 1796711 ATGCCTTCCTTGTC-CTGAATCTTCGACTTGACGTTG-TCGATGGTATCGCTGGACTCAA 1796768
Query 138566 CCTCGA 138571
||||||
Sbjct 1796769 CCTCGA 1796774
>seq1
Length=6490813
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||||| ||||| ||||| || |||| |||
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544
| || ||||| ||||| ||||| || ||||| ||||| ||| || || | | |
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599
Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604
| | ||||||| |||||| ||||||| || | || || || || || || || || |
Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539
Query 138605 A 138605
|
Sbjct 4921538 A 4921538
>seq6
Length=3558010
Score = 84.2 bits (92), Expect = 2e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459
|||| || || || | | | ||||||||||| |||||||||||| || || || |
Sbjct 445094 CGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCG 445153
Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519
|| |||||||| || |||| |||| || || || ||||| ||||| || ||||| |||
Sbjct 445154 TCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTG 445213
Query 138520 TCGGTG 138525
|| |||
Sbjct 445214 TCTGTG 445219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262325560640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |