Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq5 122 8e-23
seq3 111 1e-19
>seq5
Length=3814559
Score = 122 bits (134), Expect = 8e-23
Identities = 274/406 (67%), Gaps = 13/406 (3%)
Strand=Plus/Plus
Query 47067 ATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTC 47126
|| |||||| | |||| || || || ||||| ||||||| || | || || | |||
Sbjct 1110866 ATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCGGACAAAGA-GTC 1110924
Query 47127 ACTCTG-GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAG 47185
|| ||| |||| || |||| ||||| ||||| ||| |||||||||||||
Sbjct 1110925 GAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTC 1110984
Query 47186 CTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAA 47245
||| || | || || | |||| | ||| || | |||||||| || ||||| |||
Sbjct 1110985 CTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAA 1111044
Query 47246 CGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTC-TCTACTACAACA 47304
|||||| ||||| | || || || |||| ||| |||||||||| | ||| | |||||
Sbjct 1111045 CGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTGCCTTCTCATGCAACA 1111104
Query 47305 CTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCA---GCGACATGTTTGCCGAAGCCG 47361
|| | || ||| |||| || | ||| ||||| | ||| || |
Sbjct 1111105 TCTGA----AGCACAAGCCGGAC---CCGAAGCTCATTGAAGACATCGTCACCGCGGCTG 1111157
Query 47362 TCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACG 47421
||| || |||| |||||| | |||| |||||||| | | | || |||||||
Sbjct 1111158 TCGTGATCGAGAAGGAGTTCCTGACCGATGCTCTGCCTTGTGCCCTGCTCGGCATGAACG 1111217
Query 47422 CGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCT 47467
| || | ||| | |||||||||| || ||||| |||||||||||
Sbjct 1111218 CCAAGCTTATGCAACAGTACATCGAGTTCGTCGCTGACCGCCTGCT 1111263
>seq3
Length=4818847
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||||| ||||| || | || ||| || || || ||||||||
Sbjct 1795907 CCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1795966
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || ||||| ||||||||||||| || || || ||
Sbjct 1795967 AGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 1796026
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||||||||| ||| ||| ||||| |||| |||| ||||| | | || ||
Sbjct 1796027 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTG-TCGATAGTGTCAGAAGATTCCAC 1796085
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | ||| ||||| || ||||| || || || || |||||
Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500728674880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |