Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq5 122 8e-23 seq3 111 1e-19 >seq5 Length=3814559 Score = 122 bits (134), Expect = 8e-23 Identities = 274/406 (67%), Gaps = 13/406 (3%) Strand=Plus/Plus Query 47067 ATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTC 47126 || |||||| | |||| || || || ||||| ||||||| || | || || | ||| Sbjct 1110866 ATTCCCTGCATCCGCAAGAAAGCTGATTGGGCAATGAAGTGGATCGCGGACAAAGA-GTC 1110924 Query 47127 ACTCTG-GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAG 47185 || ||| |||| || |||| ||||| ||||| ||| ||||||||||||| Sbjct 1110925 GAGCTTCGCCCAACGACTGGTCGCGTTCGCTGCTGTCGAAGGCATCTTCTTCTCGGGTTC 1110984 Query 47186 CTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAA 47245 ||| || | || || | |||| | ||| || | |||||||| || ||||| ||| Sbjct 1110985 CTTCGCCTCCATCTTCTGGTTGAAGAGCAAGGGTCTCATGCCCGGTCTGACGTTCTCCAA 1111044 Query 47246 CGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTC-TCTACTACAACA 47304 |||||| ||||| | || || || |||| ||| |||||||||| | ||| | ||||| Sbjct 1111045 CGAGCTCATCTCTCGCGATGAGGGTATGCATACCGACTTTGCCTGCCTTCTCATGCAACA 1111104 Query 47305 CTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCA---GCGACATGTTTGCCGAAGCCG 47361 || | || ||| |||| || | ||| ||||| | ||| || | Sbjct 1111105 TCTGA----AGCACAAGCCGGAC---CCGAAGCTCATTGAAGACATCGTCACCGCGGCTG 1111157 Query 47362 TCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACG 47421 ||| || |||| |||||| | |||| |||||||| | | | || ||||||| Sbjct 1111158 TCGTGATCGAGAAGGAGTTCCTGACCGATGCTCTGCCTTGTGCCCTGCTCGGCATGAACG 1111217 Query 47422 CGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCT 47467 | || | ||| | |||||||||| || ||||| ||||||||||| Sbjct 1111218 CCAAGCTTATGCAACAGTACATCGAGTTCGTCGCTGACCGCCTGCT 1111263 >seq3 Length=4818847 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||| ||||| || | || ||| || || || |||||||| Sbjct 1795907 CCACCACGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAG 1795966 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || ||||| ||||||||||||| || || || || Sbjct 1795967 AGAGTTCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGA 1796026 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 |||||||||||||| ||| ||| ||||| |||| |||| ||||| | | || || Sbjct 1796027 ATGCCCTCCTTGTCTTGGATCTTCGACTTGACGTTG-TCGATAGTGTCAGAAGATTCCAC 1796085 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | ||| ||||| || ||||| || || || || ||||| Sbjct 1796086 CTCCAGGGTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500728674880