Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
seq5 102 7e-17
>seq3
Length=4818847
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || || | ||| ||||| || || |||||||| ||||| || |||||
Sbjct 1796132 ATACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCA 1796191
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | ||| || | ||| || || ||| | |||| || || ||||| ||
Sbjct 1796192 GAGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGG 1796251
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| ||||| || ||||| || || |||| || | |||||| || || |||
Sbjct 1796252 GGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCG 1796311
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||| || ||||||||||| || || || || || |||||
Sbjct 1796312 ACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| || || |||||||| ||||| || || |||
Sbjct 1796360 ATACCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCG 1796419
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| ||| || | || ||||| ||| | || | ||||||||||| ||
Sbjct 1796420 CTCAAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGG 1796479
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||||||||| || || || || || |||| || | || | ||| ||| |||||
Sbjct 1796480 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTATCGCTGGACTC 1796538
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || ||||| | || ||||| || || || || || || || |||||
Sbjct 1796539 GACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589
>seq5
Length=3814559
Score = 102 bits (112), Expect = 7e-17
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 138380 GCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAG 138439
||| ||||||| ||| || | ||| || ||||||||||| || |||||| ||||||||
Sbjct 1111090 GCAGGCAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACGTCAG 1111031
Query 138440 CCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaa 138499
|| ||||||| || ||| |||| | | ||||||| ||||| ||||| || ||
Sbjct 1111030 ACCGGGCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGAAGAA 1110971
Query 138500 aaCGCCTTCGACAATAGCGAAAGCCACCA 138528
| |||||||||| |||||| || ||||
Sbjct 1110970 GATGCCTTCGACAGCAGCGAACGCGACCA 1110942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003132199520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |