Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq5 102 7e-17 >seq3 Length=4818847 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | ||| ||||| || || |||||||| ||||| || ||||| Sbjct 1796132 ATACCACCTCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCA 1796191 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | ||| || | ||| || || ||| | |||| || || ||||| || Sbjct 1796192 GAGAGTGTTCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGG 1796251 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || ||||| || || |||| || | |||||| || || ||| Sbjct 1796252 GGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCG 1796311 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || |||| || ||||||||||| || || || || || ||||| Sbjct 1796312 ACTTCCAGGGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || |||||||| ||||| || || ||| Sbjct 1796360 ATACCACCACGGAGGCGGAGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCG 1796419 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| ||| || | || ||||| ||| | || | ||||||||||| || Sbjct 1796420 CTCAAGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGG 1796479 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || || || || || |||| || | || | ||| ||| ||||| Sbjct 1796480 GGAATGCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTATCGCTGGACTC 1796538 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| || ||||| | || ||||| || || || || || || || ||||| Sbjct 1796539 GACCTCAAGAGTGATGGTCTTGCCCGTAAGGGTCTTGACGAAGATCTGCAT 1796589 >seq5 Length=3814559 Score = 102 bits (112), Expect = 7e-17 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 138380 GCACGCAAAGTTGGTGTGTAAACCTTCGTCGCGAGAGATAAGTTCGTTGCTAAACGTCAG 138439 ||| ||||||| ||| || | ||| || ||||||||||| || |||||| |||||||| Sbjct 1111090 GCAGGCAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACGTCAG 1111031 Query 138440 CCCCGGCATGACGCCTTTGGTCTTGATGTAAAAGATGGCCGCGAAACTGCCCGaaaaaaa 138499 || ||||||| || ||| |||| | | ||||||| ||||| ||||| || || Sbjct 1111030 ACCGGGCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGAAGAA 1110971 Query 138500 aaCGCCTTCGACAATAGCGAAAGCCACCA 138528 | |||||||||| |||||| || |||| Sbjct 1110970 GATGCCTTCGACAGCAGCGAACGCGACCA 1110942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003132199520