Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 129 1e-24
seq6 113 1e-19
seq1 102 2e-16
>seq3
Length=4818847
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467
||| ||||| || ||||| ||||| ||||| ||||| |||| |||||| |||| | ||
Sbjct 1796140 TCGCAGTCTGAGCACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGT 1796199
Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527
|| ||||| || || ||||| ||||||||||| || ||||| ||||| || ||||||
Sbjct 1796200 TCTGCCATCCTCAAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCC 1796259
Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587
||| || || ||||| ||| || |||| |||||||| | ||| || ||||
Sbjct 1796260 TTCCTTGTCTTGGATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAG 1796319
Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| || || || || || || || || ||
Sbjct 1796320 GGTAATGGTCTTGCCGGTTAGGGTCTTGACGAAGATCTG 1796358
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||||| || ||| | ||| ||||| |||||| |||| |||||| |||| | |||
Sbjct 1795913 CGAAGTCGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTT 1795972
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||||||||||| || || ||||| | ||||| ||||| || ||| ||
Sbjct 1795973 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCC 1796032
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || || ||||| ||| ||| |||| ||||| | | ||| || ||||
Sbjct 1796033 TCCTTGTCTTGGATCTTCGACTTGACGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGG 1796092
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| || |||||||| || || || |||||
Sbjct 1796093 GTAATCGTCTTGCCAGTGAGAGTCTTGACGAAGATTTG 1796130
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| || || ||||| || ||||| |||| ||||||||| ||| || | |||||
Sbjct 1796378 AGGACGAGATGAAGAGTAGATTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCC 1796437
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| ||||||||||| |||||||| ||||| |||||||| || ||| ||||| |||
Sbjct 1796438 TCAAGCTGCTTTCCAGCGAAGATAAGACGTTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 1796497
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||| || | | || || || | ||||| |||
Sbjct 1796498 TGGATCTTGGACTTGACGTTGTCGATGGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 1796557
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| ||||| || || || || || || ||
Sbjct 1796558 TTGCCCGTAAGGGTCTTGACGAAGATCTG 1796586
Score = 113 bits (124), Expect = 1e-19
Identities = 139/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||| || || |||||||| |||| ||||||||| || || | ||||||
Sbjct 1796606 AGGACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCT 1796665
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || || || || |||||||| || ||||||||||| ||| ||| ||||| |||
Sbjct 1796666 TCGAGTTGTTTACCTGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 1796725
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||| || | | || || || | ||||| |||
Sbjct 1796726 TGAATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTC 1796785
Query 199598 TTACCCGTGA 199607
|| |||||||
Sbjct 1796786 TTTCCCGTGA 1796795
>seq6
Length=3558010
Score = 113 bits (124), Expect = 1e-19
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | |||||| | ||| || |||||||||||||||| ||||||||| | || ||
Sbjct 445088 CGAAGGCGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTG 445147
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || ||||| || ||||| ||||||||||| || || |||||||| ||| |||||||
Sbjct 445148 CGGCCGTCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCT 445207
Query 199529 TC 199530
||
Sbjct 445208 TC 445209
>seq1
Length=6490813
Score = 102 bits (112), Expect = 2e-16
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || || | ||||| || || ||||| ||||||||||
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||||||||| ||| || ||||| ||||| ||||| ||| ||| |
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGACGTTGT 4921599
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || || | ||||| ||||| |||||||| || ||||| |
Sbjct 4921598 CGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 4921539
Query 199620 A 199620
|
Sbjct 4921538 A 4921538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921418740804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |