Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 seq1 116 4e-21 seq6 104 3e-17 >seq3 Length=4818847 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 ||||| |||| || | || |||||||| ||||| ||||| || || ||||| || | Sbjct 1795919 CGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCA 1795978 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || || ||||||||||| || || ||||| ||||| ||||| | || | || ||||||| Sbjct 1795979 TCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTG 1796038 Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 || ||||||| ||||| ||| | | | ||||| |||||||| |||| || || Sbjct 1796039 TCTTGGATCTTCGACTTGA-CGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAAT 1796097 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || ||||| || || || || || ||||||||||| Sbjct 1796098 CGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| ||||| | ||| ||||| ||||| ||||| || || || || | | || || Sbjct 1796152 CACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTGCCATCCTC 1796211 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 || |||||||||||||| |||| |||||| ||||||| || | | |||||||| Sbjct 1796212 AAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTGTCTTG 1796271 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| | | | ||||| |||||| || |||| || ||||| || Sbjct 1796272 GATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTAATGGTCTT 1796331 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||| ||||| Sbjct 1796332 GCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| || ||||| | || ||||| || || || ||||| Sbjct 1796626 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAA 1796685 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || ||||||||| |||||| ||||| ||| Sbjct 1796686 GATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGA-CGT 1796744 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || ||||| || || || || | |||||||| || ||||| Sbjct 1796745 TGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTTCCCGT 1796793 >seq1 Length=6490813 Score = 116 bits (128), Expect = 4e-21 Identities = 137/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || || || | || || || |||||||||||||| | Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| ||||||||||||| || | || ||||||||| |||||| ||||| ||| | Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 4921600 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||| ||| || || || | |||||||| |||||||| || || || || Sbjct 4921599 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 4921540 Query 46583 AAG 46585 ||| Sbjct 4921539 AAG 4921537 >seq6 Length=3558010 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| |||| |||| || |||||||||||| ||||||||||| || ||||| || Sbjct 445094 CGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCG 445153 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || ||||| |||||||||||||| |||| ||| |||||||||| || | | |||||| Sbjct 445154 TCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTG 445213 Query 46499 TC 46500 || Sbjct 445214 TC 445215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238315214240