Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq3 131 2e-25
seq1 116 4e-21
seq6 104 3e-17
>seq3
Length=4818847
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
||||| |||| || | || |||||||| ||||| ||||| || || ||||| || |
Sbjct 1795919 CGCAAGACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAATCAGAGAGAGTTCGGCCA 1795978
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||| || || ||||| ||||| ||||| | || | || |||||||
Sbjct 1795979 TCTTCCAGCTGCTTGCCAGCAAAGATCAATCGCTGTTGGTCAGGGGGAATGCCCTCCTTG 1796038
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|| ||||||| ||||| ||| | | | ||||| |||||||| |||| || ||
Sbjct 1796039 TCTTGGATCTTCGACTTGA-CGTTGTCGATAGTGTCAGAAGATTCCACCTCCAGGGTAAT 1796097
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || || || || || |||||||||||
Sbjct 1796098 CGTCTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 1796133
Score = 104 bits (114), Expect = 3e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| ||||| | ||| ||||| ||||| ||||| || || || || | | || ||
Sbjct 1796152 CACAAGATGGAGTGTCGATTCCTTCTGGATGTTGTAATCAGAGAGTGTTCTGCCATCCTC 1796211
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
|| |||||||||||||| |||| |||||| ||||||| || | | ||||||||
Sbjct 1796212 AAGTTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATTCCTTCCTTGTCTTG 1796271
Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563
|||||| ||||| | | | ||||| |||||| || |||| || ||||| ||
Sbjct 1796272 GATCTTGGACTTGACATTGTCGATGGTGTCTGACGATTCGACTTCCAGGGTAATGGTCTT 1796331
Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || || || || || ||||| |||||
Sbjct 1796332 GCCGGTTAGGGTCTTGACGAAGATCTGCAT 1796361
Score = 95.1 bits (104), Expect = 1e-14
Identities = 124/169 (73%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || ||||| | || ||||| || || || |||||
Sbjct 1796626 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGTTGTTTACCTGCGAA 1796685
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||||||| | || | || ||||||||| |||||| ||||| |||
Sbjct 1796686 GATAAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGAATCTTCGACTTGA-CGT 1796744
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | | || ||||| || || || || | |||||||| || |||||
Sbjct 1796745 TGTCGATGGTATCGCTGGACTCAACCTCGAGGGTGATGGTCTTTCCCGT 1796793
>seq1
Length=6490813
Score = 116 bits (128), Expect = 4e-21
Identities = 137/183 (75%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || || || | || || || |||||||||||||| |
Sbjct 4921718 CCTTCTGGATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGTTGCTTGCCGGCGAAGA 4921659
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| ||||||||||||| || | || ||||||||| |||||| ||||| ||| |
Sbjct 4921658 TCAGTCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGACTTGA-CGTTG 4921600
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||| ||| || || || | |||||||| |||||||| || || || ||
Sbjct 4921599 TCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACG 4921540
Query 46583 AAG 46585
|||
Sbjct 4921539 AAG 4921537
>seq6
Length=3558010
Score = 104 bits (114), Expect = 3e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| |||| |||| || |||||||||||| ||||||||||| || ||||| ||
Sbjct 445094 CGCAGGACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCG 445153
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||| |||||||||||||| |||| ||| |||||||||| || | | ||||||
Sbjct 445154 TCTTCGAGTTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGAGGAATTCCTTCCTTG 445213
Query 46499 TC 46500
||
Sbjct 445214 TC 445215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238315214240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |