Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01]
12 sequences; 29,853,552 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq5 141 9e-29
seq3 116 4e-21
seq1 109 5e-19
seq6 107 2e-18
>seq5
Length=3814559
Score = 141 bits (156), Expect = 9e-29
Identities = 289/422 (68%), Gaps = 8/422 (2%)
Strand=Plus/Minus
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779
||||| | ||| || |||||||||||||| || ||| | || || | | | || ||
Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATG-CCGAG 1111205
Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838
||| |||| ||||| || ||||| || || | |||||| |||| || ||||||
Sbjct 1111204 CAGG-GCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGA 1111146
Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAG 132898
|||| || || | || || | |||| ||| || ||| | | | | ||| |
Sbjct 1111145 CGATGTCTTCAATGAGCTTCGGGTCCGGCTTGTGCTTCAGATGTTGCATGAGAAGGCAGG 1111086
Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958
|||||||| ||||| ||||| || | || ||||| |||||| ||| |||| ||||
Sbjct 1111085 CAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACGTCAGACCGG 1111026
Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018
||||||| || | || | ||| || |||| |||||| ||||| ||||||| ||
Sbjct 1111025 GCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGAAGAAGATGC 1110966
Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078
| ||||| || ||||| || ||||| || | | |||| | | |||||| |||||||
Sbjct 1110965 CTTCGACAGCAGCGAACGCGACCAGTCGTTGGGCGAAGCTCGACTCTTTGTCCGCGATCC 1110906
Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTT--TGACGCACGGCATCGTTTCGATGGCGTTCAA 133136
| || ||||| || || |||||| || ||| || || || || ||||| | ||
Sbjct 1110905 ACTTCATTGCCCAATCAGC--TTTCTTGCGGATGCAGGGAATTGTGTCAATGGCATCGAA 1110848
Query 133137 CA 133138
||
Sbjct 1110847 CA 1110846
>seq3
Length=4818847
Score = 116 bits (128), Expect = 4e-21
Identities = 157/216 (73%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || |||||||| |||||||| | || |||||| ||| |
Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || || |||| ||||| || || |||||| | |||||
Sbjct 1796529 GATACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 1796471
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || || || | ||| || || ||||| || || | |||||| | | |||||||||
Sbjct 1796470 GCAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGCGACTACAA 1796411
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| |||||| | || || ||| | || || ||
Sbjct 1796410 CATCCAGAAGGAATCTACTCTTCATCTCGTCCTCCG 1796375
Score = 111 bits (122), Expect = 2e-19
Identities = 143/195 (73%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
||||||| || ||||||||| |||| || ||| ||| ||| | | | | |||| | ||
Sbjct 1796795 TCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 1796737
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| || | ||||| || || ||||| | ||||| ||||| || || | ||| ||
Sbjct 1796736 TCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGT 1796677
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
||||| || || || | |||||||| | ||||||||||||||| ||||| | || |||
Sbjct 1796676 AAACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTG 1796617
Query 38445 CATTTGGTGCTGCGT 38459
|| ||||| || |||
Sbjct 1796616 CACTTGGTCCTCCGT 1796602
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||| ||| | || ||||| | |
Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| || ||||||||| ||||||||
Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| || || || || | | || ||| || ||||||
Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455
||||| |||||| |||| || ||| | |||||
Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCT 1796150
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| ||||| || || ||| | || || || | |
Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 1796073 GACACTATCGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCA 1796015
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|||||| | || | || ||||| |||||||| || | || || ||| || |||||
Sbjct 1796014 ACAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAA 1795955
Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| ||| || || || ||||| ||||
Sbjct 1795954 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTCTTGCG 1795919
>seq1
Length=6490813
Score = 109 bits (120), Expect = 5e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||||||||| ||||||||| |||| |||||| | |||||| |
Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597
Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371
| |||| | || || |||| ||||| || || || || ||||||| ||||| ||
Sbjct 4921598 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACT 4921656
Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431
|| | ||| ||||| || || || || | || ||||| | ||||||||||||||| ||
Sbjct 4921657 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716
Query 38432 GG 38433
||
Sbjct 4921717 GG 4921718
>seq6
Length=3558010
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| || |||||||| ||||||| || || || || | ||| ||||| || || ||
Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| |||||||| ||||||||||||||||||||| |||| ||||| ||||| |||
Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCTG 445096
Query 38457 CG 38458
||
Sbjct 445095 CG 445094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172724974080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |