Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20alcalophila_20[genbank_20GCA_5F001599775.1_202016-03-01] 12 sequences; 29,853,552 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq5 141 9e-29 seq3 116 4e-21 seq1 109 5e-19 seq6 107 2e-18 >seq5 Length=3814559 Score = 141 bits (156), Expect = 9e-29 Identities = 289/422 (68%), Gaps = 8/422 (2%) Strand=Plus/Minus Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779 ||||| | ||| || |||||||||||||| || ||| | || || | | | || || Sbjct 1111263 AGCAGGCGGTCAGCGACGAACTCGATGTACTGTTGCATAAGCTTGGCGTTCATG-CCGAG 1111205 Query 132780 CAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 ||| |||| ||||| || ||||| || || | |||||| |||| || |||||| Sbjct 1111204 CAGG-GCACAAGGCAGAGCATCGGTCAGGAACTCCTTCTCGATCACGACAGCCGCGGTGA 1111146 Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAG 132898 |||| || || | || || | |||| ||| || ||| | | | | ||| | Sbjct 1111145 CGATGTCTTCAATGAGCTTCGGGTCCGGCTTGTGCTTCAGATGTTGCATGAGAAGGCAGG 1111086 Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958 |||||||| ||||| ||||| || | || ||||| |||||| ||| |||| |||| Sbjct 1111085 CAAAGTCGGTATGCATACCCTCATCGCGAGAGATGAGCTCGTTGGAGAACGTCAGACCGG 1111026 Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018 ||||||| || | || | ||| || |||| |||||| ||||| ||||||| || Sbjct 1111025 GCATGAGACCCTTGCTCTTCAACCAGAAGATGGAGGCGAAGGAACCCGAGAAGAAGATGC 1110966 Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078 | ||||| || ||||| || ||||| || | | |||| | | |||||| ||||||| Sbjct 1110965 CTTCGACAGCAGCGAACGCGACCAGTCGTTGGGCGAAGCTCGACTCTTTGTCCGCGATCC 1110906 Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTT--TGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 | || ||||| || || |||||| || ||| || || || || ||||| | || Sbjct 1110905 ACTTCATTGCCCAATCAGC--TTTCTTGCGGATGCAGGGAATTGTGTCAATGGCATCGAA 1110848 Query 133137 CA 133138 || Sbjct 1110847 CA 1110846 >seq3 Length=4818847 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || |||||||| |||||||| | || |||||| ||| | Sbjct 1796589 ATGCAGATCTTCGTCAAGACCCTTACGGGCAAGACCATCACTCTTGAGGTCGAGTCCAGC 1796530 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || || |||| ||||| || || |||||| | ||||| Sbjct 1796529 GATACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 1796471 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| || || ||||| || || | |||||| | | ||||||||| Sbjct 1796470 GCAACGTCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCTTGAGCGACTACAA 1796411 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| |||||| | || || ||| | || || || Sbjct 1796410 CATCCAGAAGGAATCTACTCTTCATCTCGTCCTCCG 1796375 Score = 111 bits (122), Expect = 2e-19 Identities = 143/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 ||||||| || ||||||||| |||| || ||| ||| ||| | | | | |||| | || Sbjct 1796795 TCACGGGAAAGACCATCACCCTCGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 1796737 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || || | ||||| || || ||||| | ||||| ||||| || || | ||| || Sbjct 1796736 TCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTTATCTTCGCAGGT 1796677 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 ||||| || || || | |||||||| | ||||||||||||||| ||||| | || ||| Sbjct 1796676 AAACAACTCGAAGATGGCCGCACCCTGAGCGACTACAACATCCAGAAGGAGTCCACCCTG 1796617 Query 38445 CATTTGGTGCTGCGT 38459 || ||||| || ||| Sbjct 1796616 CACTTGGTCCTCCGT 1796602 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| ||||| ||| | || ||||| | | Sbjct 1796361 ATGCAGATCTTCGTCAAGACCCTAACCGGCAAGACCATTACCCTGGAAGTCGAATCGTCA 1796302 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| || ||||||||| |||||||| Sbjct 1796301 GACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCCCCCGACCAA 1796242 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| || || || || | | || ||| || |||||| Sbjct 1796241 CAGCGCCTGATCTTCGCCGGCAAGCAACTTGAGGATGGCAGAACACTCTCTGATTACAAC 1796182 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 ||||| |||||| |||| || ||| | ||||| Sbjct 1796181 ATCCAGAAGGAATCGACACTCCATCTTGTGCT 1796150 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| || || ||| | || || || | | Sbjct 1796133 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAGACGATTACCCTGGAGGTGGAATCTTCT 1796074 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || || |||| ||||| ||||| |||||| | ||||| Sbjct 1796073 GACACTATCGACAACG-TCAAGTCGAAGATCCAAGACAAGGAGGGCATTCCCCCTGACCA 1796015 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || ||||| |||||||| || | || || ||| || ||||| Sbjct 1796014 ACAGCGATTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGAACTCTCTCTGATTACAA 1795955 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||| || || || ||||| |||| Sbjct 1795954 CATCCAGAAGGAGAGC-ACTCTTCACTTGGTCTTGCG 1795919 >seq1 Length=6490813 Score = 109 bits (120), Expect = 5e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || ||||||||||| ||||||||| |||| |||||| | |||||| | Sbjct 4921538 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATC 4921597 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| || || || || ||||||| ||||| || Sbjct 4921598 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACT 4921656 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| || || || || | || ||||| | ||||||||||||||| || Sbjct 4921657 GATCTTCGCCGGCAAGCAACTTGAGGATGGCCGTACCCTGAGCGACTACAACATCCAGAA 4921716 Query 38432 GG 38433 || Sbjct 4921717 GG 4921718 >seq6 Length=3558010 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| || |||||||| ||||||| || || || || | ||| ||||| || || || Sbjct 445215 GACAAGGAAGGAATTCCTCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAACTCGAA 445156 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 |||| |||||||| ||||||||||||||||||||| |||| ||||| ||||| ||| Sbjct 445155 GACGGCCGCACCCTGTCCGACTACAACATCCAAAAGGAGTCGACCCTGCACTTGGTCCTG 445096 Query 38457 CG 38458 || Sbjct 445095 CG 445094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172724974080